C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: netrin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343702 NTN4-001 ENSG00000074527 9606 - 12:95657807-95790758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343702 2.979±0.00 1.354±0.00 5.719±0.00 1.361±0.18 3.592±1.56 3.233±2.79 7.859±5.99 44.366±0.00 6.999±6.46 8.707±3.92 1.073±0.65 2.959±3.20 4.000±2.29 1.643±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y3 CIL_0000Y3_0002 CGP 12:95657807-95903828

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005604 IEA basement membrane
GO:0005886 TAS plasma membrane
GO:0007411 TAS axon guidance
GO:0016322 IEA neuron remodeling
GO:0030198 TAS extracellular matrix organization
GO:0043237 IEA laminin-1 binding
GO:0060668 IEA regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020204 Ntn4-001 protein_coding Mus_musculus 0 2021
ENSMUST00000147080 Ntn4-002 protein_coding Mus_musculus 0 568

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