C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: partner of NOB1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020317 Pno1-001 ENSMUSG00000020116 10090 - 11:17203198-17211568 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000020317
Transcript ID Adipose Bladder Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000020317 6.057±0.76 9.723±1.96 4.210±0.00 4.465±0.00 9.306±4.77 22.959±1.50 13.311±2.52 24.537±10.74 4.278±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I2 CIL_0008I2_0002 VISTA 11:16884831-17492556
CIL_0007JR CIL_0007JR_0004 UCNEbase 11:17198316-19679637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005730 ISS nucleolus
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263657 PNO1-001 protein_coding Homo_sapiens 0 874
ENST00000430742 PNO1-002 nonsense_mediated_decay Homo_sapiens 0 375

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