C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class I, type 8B, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020383 Atp8b3-201 ENSMUSG00000003341 10090 - 10:80519585-80539124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000020383
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000020383 0.013±0.01 0.113±0.06 0.007±0.00 0.218±0.00 0.031±0.01 0.011±0.00 0.163±0.02 0.123±0.05 0.014±0.01 0.045±0.01 0.097±0.04 0.208±0.10 437.305±50.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZE CIL_0005ZE_0003 CGP 10:80494835-80539124
CIL_000187 CIL_000187_0002 CGP 10:80519585-80561560

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0001669 IDA acrosomal vesicle
GO:0004012 IMP phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005783 IEA endoplasmic reticulum
GO:0007339 IMP binding of sperm to zona pellucida
GO:0008152 IEA metabolic process
GO:0016021 IDA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IMP phospholipid translocation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310127 ATP8B3-002 protein_coding Homo_sapiens 0 1170
ENST00000525591 ATP8B3-005 protein_coding Homo_sapiens 0 1290
ENST00000526847 ATP8B3-008 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000531925 ATP8B3-003 nonsense_mediated_decay Homo_sapiens 0 1131

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