C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stanniocalcin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020546 Stc2-001 ENSMUSG00000020303 10090 - 11:31357307-31370074 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020546
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020546 4.197±0.35 0.262±0.10 9.655±2.72 0.244±0.15 20.088±3.35 5.480±0.92 3.317±0.39 1.640±0.13 0.199±0.15 0.835±0.10 0.515±0.12 6.438±2.15 0.195±0.12 0.250±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DP CIL_0002DP_0002 CGP 11:31357307-31671885

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005179 IEA hormone activity
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0006874 IMP cellular calcium ion homeostasis
GO:0006979 IMP response to oxidative stress
GO:0007566 IEA embryo implantation
GO:0010629 IEA negative regulation of gene expression
GO:0019899 IEA enzyme binding
GO:0020037 IEA heme binding
GO:0030968 IMP endoplasmic reticulum unfolded protein response
GO:0033280 IEA response to vitamin D
GO:0034976 IMP response to endoplasmic reticulum stress
GO:0040015 IMP negative regulation of multicellular organism growth
GO:0042803 IEA protein homodimerization activity
GO:0043434 IEA response to peptide hormone
GO:0046697 IEA decidualization
GO:0046885 IEA regulation of hormone biosynthetic process
GO:0048471 IEA perinuclear region of cytoplasm
GO:0055074 IGI calcium ion homeostasis
GO:0071456 IEA cellular response to hypoxia
GO:2001256 IMP regulation of store-operated calcium entry

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265087 STC2-001 protein_coding Homo_sapiens 0 1234
ENST00000519511 STC2-003 retained_intron Homo_sapiens 0 643
ENST00000520648 STC2-006 protein_coding Homo_sapiens 0 385

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