C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NIPA-like domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020679 Nipal4-001 ENSMUSG00000020411 10090 - 11:46148155-46166508 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020679
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020679 0.765±0.64 0.059±0.04 10.953±1.17 0.231±0.05 0.921±0.38 1.556±0.23 0.064±0.02 0.107±0.04 0.043±0.02 1.996±1.66 0.035±0.02 1.271±0.58 0.776±0.38 0.075±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094M CIL_00094M_0002 VISTA 11:45901358-46503267
CIL_00023R CIL_00023R_0002 CGP 11:46055992-46166508

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0015095 IEA magnesium ion transmembrane transporter activity
GO:0015693 IDA magnesium ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311946 NIPAL4-001 protein_coding Homo_sapiens 0 1266
ENST00000435489 NIPAL4-002 protein_coding Homo_sapiens 0 983
ENST00000519150 NIPAL4-005 nonsense_mediated_decay Homo_sapiens 0 617

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