C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: insulin-like growth factor binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020704 Igfbp1-001 ENSMUSG00000020429 10090 + 11:7197782-7202546 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000020704
Transcript ID Adrenal Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000020704 0.083±0.03 0.005±0.00 0.044±0.02 0.228±0.15 15.865±2.86 161.974±299.20 0.058±0.01 0.213±0.12 8.926±9.32 0.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WT CIL_0008WT_0002 VISTA 11:6754211-7357799
CIL_00072L CIL_00072L_0003 CGP 11:7063489-7202546
CIL_0005P5 CIL_0005P5_0003 CGP 11:7197782-7213923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005520 IPI insulin-like growth factor binding
GO:0005615 IDA extracellular space
GO:0008286 IEA insulin receptor signaling pathway
GO:0030307 IEA positive regulation of cell growth
GO:0042246 IEA tissue regeneration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275525 IGFBP1-001 protein_coding Homo_sapiens 0 433
ENST00000457280 IGFBP1-002 protein_coding Homo_sapiens 0 394

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