C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008WT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm1025 VISTA 9606 7:45262733-45867007
GeneTranscriptPositionBiotype
ENSG00000164742 (ADCY1)
adenylate cyclase 1 (brain) 		ENST00000297323 (ADCY1-001) 45574522-45723116 protein_coding
ENST00000432715 (ADCY1-002) 45574140-45664672 protein_coding
ENST00000468353 (ADCY1-003) 45684385-45686040 retained_intron
ENST00000621543 (ADCY1-201) 45574885-45664671 protein_coding
ENSG00000214765 (SEPT7P2)
septin 7 pseudogene 2 		ENST00000338231 (SEPT7P2-004) 45723788-45758177 processed_transcript
ENST00000398921 (SEPT7P2-010) 45736787-45765812 transcribed_unprocessed_pseudogene
ENST00000413357 (SEPT7P2-005) 45726045-45728990 retained_intron
ENST00000413875 (SEPT7P2-006) 45727827-45748664 retained_intron
ENST00000428414 (SEPT7P2-002) 45724050-45768964 processed_transcript
ENST00000428867 (SEPT7P2-009) 45757984-45759472 retained_intron
ENST00000429741 (SEPT7P2-001) 45723787-45768954 processed_transcript
ENST00000444755 (SEPT7P2-007) 45723780-45728310 processed_transcript
ENST00000450436 (SEPT7P2-008) 45758111-45768985 processed_transcript
ENSG00000226838 (AC096582.8)
 ENST00000413839 (AC096582.8-001) 45816557-45821064 unprocessed_pseudogene
ENSG00000226999 (AC073325.2)
 ENST00000339545 (AC073325.2-001) 45534523-45534681 processed_pseudogene
ENSG00000234359 (ELK1P1)
ELK1 pseudogene 1 		ENST00000485699 (ELK1P1-001) 45391626-45392205 processed_pseudogene
ENSG00000234536 (AC096582.7)
 ENST00000438487 (AC096582.7-001) 45773595-45783157 unprocessed_pseudogene
ENSG00000235955 (CICP20)
capicua transcriptional repressor pseudogene 20 		ENST00000443330 (CICP20-001) 45816216-45819016 processed_pseudogene
ENSG00000251378 (AC096582.9)
 ENST00000510860 (AC096582.9-001) 45818582-45819097 unprocessed_pseudogene
ENSG00000272556 (RP11-638I8.1)
 ENST00000609439 (RP11-638I8.1-001) 45814602-45815263 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008WT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm1025 VISTA 10090 11:6754211-7357799
GeneTranscriptPositionBiotype
ENSMUSG00000020427 (Igfbp3)
insulin-like growth factor binding protein 3 		ENSMUST00000020702 (Igfbp3-001) 7206086-7213897 protein_coding
ENSMUST00000135887 (Igfbp3-002) 7207686-7213923 protein_coding
ENSMUSG00000020429 (Igfbp1)
insulin-like growth factor binding protein 1 		ENSMUST00000020704 (Igfbp1-001) 7197782-7202546 protein_coding
ENSMUSG00000020431 (Adcy1)
adenylate cyclase 1 		ENSMUST00000020706 (Adcy1-001) 7063489-7178506 protein_coding
ENSMUST00000135398 (Adcy1-002) 7159882-7172879 processed_transcript
ENSMUSG00000082333 (Gm11984)
predicted gene 11984 		ENSMUST00000118142 (Gm11984-001) 6861539-6862304 processed_pseudogene
ENSMUSG00000082579 (Gm11979)
predicted gene 11979 		ENSMUST00000119629 (Gm11979-001) 6785838-6786580 processed_pseudogene
ENSMUSG00000082897 (Gm11982)
predicted gene 11982 		ENSMUST00000121480 (Gm11982-001) 6825496-6825809 processed_pseudogene
ENSMUSG00000083819 (Gm11977)
predicted gene 11977 		ENSMUST00000118511 (Gm11977-001) 6781678-6783138 processed_pseudogene
ENSMUSG00000087512 (Gm11985)
predicted gene 11985 		ENSMUST00000122910 (Gm11985-001) 7183153-7186290 antisense
ENSMUSG00000087637 (Gm11986)
predicted gene 11986 		ENSMUST00000149481 (Gm11986-001) 7270351-7290374 lincRNA
ENSMUSG00000099102 (Gm11983)
predicted gene 11983 		ENSMUST00000184257 (Gm11983-001) 6835626-6837654 translated_processed_pseudogene
ENSMUST00000184940 (Gm11983-002) 6836808-6837125 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008WT_0001ENSG00000164742ENST00000297323ENST00000432715ENST00000468353ENST00000621543ENSG00000214765ENST00000338231ENST00000398921ENST00000413357ENST00000413875ENST00000428414ENST00000428867ENST00000429741ENST00000444755ENST00000450436ENSG00000226838ENST00000413839ENSG00000226999ENST00000339545ENSG00000234359ENST00000485699ENSG00000234536ENST00000438487ENSG00000235955ENST00000443330ENSG00000251378ENST00000510860ENSG00000272556ENST00000609439CIL_0008WT_0002ENSMUSG00000020427ENSMUST00000020702ENSMUST00000135887ENSMUSG00000020429ENSMUST00000020704ENSMUSG00000020431ENSMUST00000020706ENSMUST00000135398ENSMUSG00000082333ENSMUST00000118142ENSMUSG00000082579ENSMUST00000119629ENSMUSG00000082897ENSMUST00000121480ENSMUSG00000083819ENSMUST00000118511ENSMUSG00000087512ENSMUST00000122910ENSMUSG00000087637ENSMUST00000149481ENSMUSG00000099102ENSMUST00000184257ENSMUST00000184940
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008WT_0001ENSG00000164742ENST00000297323ENST00000621543ENSG00000214765ENST00000338231ENST00000398921ENST00000413875ENST00000428414ENST00000429741ENSG00000226838ENST00000413839ENSG00000226999ENST00000339545ENSG00000234359ENST00000485699ENSG00000234536ENST00000438487ENSG00000235955ENST00000443330ENSG00000251378ENST00000510860ENSG00000272556ENST00000609439CIL_0008WT_0002ENSMUSG00000020427ENSMUST00000020702ENSMUST00000135887ENSMUSG00000020429ENSMUST00000020704ENSMUSG00000020431ENSMUST00000020706ENSMUST00000135398ENSMUSG00000082333ENSMUST00000118142ENSMUSG00000082579ENSMUST00000119629ENSMUSG00000082897ENSMUST00000121480ENSMUSG00000083819ENSMUST00000118511ENSMUSG00000087512ENSMUST00000122910ENSMUSG00000087637ENSMUST00000149481ENSMUSG00000099102ENSMUST00000184257ENSMUST00000184940
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164742 ENST00000297323 N/A N/A N/A 1.832±0.00 0.480±0.00 N/A 1.215±0.00 1.130±0.00 1.063±0.00 N/A N/A N/A 0.200±0.16 N/A
ENST00000432715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621543 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.415±0.00 N/A 0.125±0.00 0.415±0.17 0.919±0.00
ENSG00000214765 ENST00000338231 N/A N/A N/A 0.948±0.00 0.684±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398921 N/A N/A N/A N/A N/A N/A N/A N/A 0.685±0.47 N/A N/A N/A N/A N/A
ENST00000413357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413875 0.339±0.00 0.943±0.00 N/A 1.533±0.54 0.481±0.00 1.043±0.63 0.318±0.00 0.729±0.26 0.704±0.00 0.418±0.00 1.154±0.00 2.436±0.75 1.210±0.69 2.015±0.00
ENST00000428414 N/A 0.846±0.00 0.365±0.00 0.769±0.00 0.444±0.13 0.384±0.00 0.247±0.00 0.620±0.00 N/A 0.955±0.00 N/A 0.737±0.27 0.289±0.08 1.515±0.18
ENST00000428867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429741 0.590±0.00 2.179±0.00 N/A 1.625±0.00 1.146±0.00 0.490±0.31 0.304±0.14 0.484±0.17 0.196±0.04 0.603±0.00 0.397±0.00 1.056±0.13 0.476±0.00 2.129±0.81
ENST00000444755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226838 ENST00000413839 N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.260±0.00
ENSG00000226999 ENST00000339545 0.112±0.00 0.120±0.00 N/A N/A 0.123±0.00 0.112±0.00 N/A N/A N/A 0.114±0.00 N/A N/A N/A 0.106±0.00
ENSG00000234359 ENST00000485699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A 0.133±0.00
ENSG00000234536 ENST00000438487 0.270±0.00 0.069±0.00 1.397±0.00 0.068±0.00 0.731±0.50 0.547±0.00 N/A 0.136±0.00 0.060±0.00 N/A N/A 0.280±0.06 0.191±0.04 2.506±2.20
ENSG00000235955 ENST00000443330 N/A N/A N/A N/A 0.010±0.00 0.017±0.00 N/A N/A N/A 0.031±0.00 N/A 0.011±0.00 0.026±0.00 0.107±0.06
ENSG00000251378 ENST00000510860 N/A N/A N/A N/A 0.135±0.00 N/A 0.060±0.00 0.128±0.00 N/A 0.190±0.00 N/A 0.490±0.00 N/A 0.287±0.00
ENSG00000272556 ENST00000609439 0.996±0.00 1.085±0.00 N/A 0.891±0.00 0.855±0.10 0.296±0.00 0.657±0.00 0.226±0.00 0.826±0.00 2.492±2.11 1.298±0.00 2.475±0.98 1.003±0.00 10.460±3.91
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020427 ENSMUST00000020702 58.461±29.50 16.370±5.09 29.691±0.80 6.529±4.35 16.022±3.23 16.548±2.36 11.493±0.39 158.562±13.49 14.782±5.42 28.882±1.52 6.701±0.62 20.128±5.30 12.581±10.45 0.982±0.46
ENSMUST00000135887 4.445±0.00 94.450±20.90 N/A 1.973±0.90 22.969±9.43 26.867±7.00 N/A 65.644±0.00 4.279±1.38 14.717±10.63 N/A 52.278±12.48 N/A N/A
ENSMUSG00000020429 ENSMUST00000020704 N/A 0.083±0.03 0.005±0.00 0.044±0.02 0.228±0.15 N/A N/A 15.865±2.86 161.974±299.20 0.058±0.01 N/A 0.213±0.12 8.926±9.32 0.043±0.00
ENSMUSG00000020431 ENSMUST00000020706 1.709±1.58 0.760±0.08 0.747±0.01 19.360±19.14 0.324±0.10 0.419±0.05 1.137±0.04 1.661±0.57 0.043±0.03 0.426±0.16 0.183±0.03 0.555±0.36 0.289±0.16 0.154±0.10
ENSMUST00000135398 N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.09 0.194±0.00 0.078±0.01 0.150±0.02 0.551±0.20 0.161±0.05
ENSMUSG00000082333 ENSMUST00000118142 N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000082579 ENSMUST00000119629 0.078±0.04 0.111±0.00 0.129±0.06 0.081±0.02 0.292±0.14 0.109±0.00 0.100±0.03 0.122±0.08 0.060±0.04 0.068±0.01 N/A 0.277±0.18 0.060±0.07 N/A
ENSMUSG00000082897 ENSMUST00000121480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.415±0.00
ENSMUSG00000083819 ENSMUST00000118511 0.124±0.10 N/A 0.006±0.00 0.129±0.12 N/A N/A 0.024±0.00 0.028±0.00 0.004±0.00 N/A N/A 0.066±0.05 N/A 0.202±0.00
ENSMUSG00000087512 ENSMUST00000122910 N/A N/A N/A 0.052±0.00 N/A N/A N/A 0.081±0.03 0.015±0.00 N/A N/A 0.975±0.37 0.394±0.16 0.137±0.00
ENSMUSG00000087637 ENSMUST00000149481 0.064±0.00 N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099102 ENSMUST00000184257 N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A 0.005±0.00 N/A N/A 0.046±0.04 0.010±0.01 0.163±0.11
ENSMUST00000184940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.00

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