C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HCLS1 binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020927 Hs1bp3-201 ENSMUSG00000020605 10090 + 12:8313433-8343824 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020927
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020927 11.230±2.16 11.193±0.60 8.071±0.15 2.770±0.69 12.280±3.89 9.904±1.81 4.472±1.16 9.235±1.65 4.788±2.36 9.591±2.01 1.775±0.38 10.439±3.79 9.446±4.30 0.476±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PO CIL_0008PO_0002 VISTA 12:8085675-8687404

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0007166 TAS cell surface receptor signaling pathway
GO:0030217 TAS T cell differentiation
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304031 HS1BP3-001 protein_coding Homo_sapiens 0 963
ENST00000402541 HS1BP3-003 protein_coding Homo_sapiens 0 604
ENST00000406618 HS1BP3-002 protein_coding Homo_sapiens 0 527
ENST00000446825 HS1BP3-006 nonsense_mediated_decay Homo_sapiens 0 505

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