C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sh3 domain YSC-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020997 Sh3yl1-001 ENSMUSG00000020669 10090 + 12:30911668-30960162 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020997 0.933±0.38 0.323±0.16 6.139±2.58 6.350±0.97 0.408±0.00 1.328±0.00 0.325±0.14 5.484±1.54 6.627±6.73 0.895±0.45 0.314±0.04 1.994±1.28 2.128±1.26 4.412±1.83

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006661 IMP phosphatidylinositol biosynthetic process
GO:0019902 ISO phosphatase binding
GO:0032587 IEA ruffle membrane
GO:0035091 IEA phosphatidylinositol binding
GO:1900027 IMP regulation of ruffle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356150 SH3YL1-001 protein_coding Homo_sapiens 0 1168
ENST00000402632 SH3YL1-004 protein_coding Homo_sapiens 0 403
ENST00000403657 SH3YL1-011 protein_coding Homo_sapiens 0 398
ENST00000403658 SH3YL1-005 protein_coding Homo_sapiens 0 398
ENST00000403712 SH3YL1-002 protein_coding Homo_sapiens 0 826
ENST00000405430 SH3YL1-003 protein_coding Homo_sapiens 0 1164
ENST00000415368 SH3YL1-016 protein_coding Homo_sapiens 0 219
ENST00000431160 SH3YL1-019 protein_coding Homo_sapiens 0 510
ENST00000451005 SH3YL1-020 protein_coding Homo_sapiens 0 399
ENST00000454318 SH3YL1-023 protein_coding Homo_sapiens 0 398
ENST00000463865 SH3YL1-007 processed_transcript Homo_sapiens 0 1158
ENST00000468321 SH3YL1-006 processed_transcript Homo_sapiens 0 1127
ENST00000471948 SH3YL1-010 retained_intron Homo_sapiens 0 797
ENST00000473104 SH3YL1-008 processed_transcript Homo_sapiens 0 398
ENST00000475027 SH3YL1-024 processed_transcript Homo_sapiens 0 398
ENST00000479739 SH3YL1-009 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000488044 SH3YL1-022 processed_transcript Homo_sapiens 0 691
ENST00000488979 SH3YL1-017 processed_transcript Homo_sapiens 0 617

Loading