C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ferredoxin reductase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021078 Fdxr-001 ENSMUSG00000018861 10090 - 11:115268024-115277050 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021078
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021078 5.742±1.18 690.221±196.58 3.140±0.27 3.779±1.95 8.299±1.78 8.609±1.74 2.453±0.42 5.880±0.69 10.522±1.88 4.453±0.50 1.264±0.20 100.332±39.60 12.752±9.29 8.875±1.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FN CIL_0001FN_0002 CGP 11:115249169-115277050
CIL_00008P CIL_00008P_0002 CGP 11:115268024-115297663

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0008203 IEA cholesterol metabolic process
GO:0015039 IEA NADPH-adrenodoxin reductase activity
GO:0070402 IEA NADPH binding
GO:0070995 IEA NADPH oxidation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293195 FDXR-001 protein_coding Homo_sapiens 0 1563
ENST00000413947 FDXR-008 protein_coding Homo_sapiens 0 1485
ENST00000420580 FDXR-009 protein_coding Homo_sapiens 0 1162
ENST00000442102 FDXR-002 protein_coding Homo_sapiens 0 1386
ENST00000544854 FDXR-011 protein_coding Homo_sapiens 0 1382
ENST00000577509 FDXR-010 nonsense_mediated_decay Homo_sapiens 0 1520
ENST00000578473 FDXR-005 retained_intron Homo_sapiens 0 1524
ENST00000579482 FDXR-007 nonsense_mediated_decay Homo_sapiens 0 876
ENST00000581530 FDXR-018 protein_coding Homo_sapiens 0 1478
ENST00000582710 FDXR-016 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000582944 FDXR-006 protein_coding Homo_sapiens 0 1258
ENST00000583881 FDXR-004 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000583917 FDXR-003 protein_coding Homo_sapiens 0 706

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