C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001FN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161509-ENSG00000161513 CGP 9606 17:74842023-74873031
GeneTranscriptPositionBiotype
ENSG00000161509 (GRIN2C)
glutamate receptor, ionotropic, N-methyl D-aspartate 2C 		ENST00000293190 (GRIN2C-001) 74842023-74859875 protein_coding
ENST00000347612 (GRIN2C-002) 74844032-74860535 protein_coding
ENST00000578159 (GRIN2C-005) 74852074-74861504 processed_transcript
ENST00000584176 (GRIN2C-004) 74843364-74859872 retained_intron
ENST00000584496 (GRIN2C-003) 74853517-74860841 retained_intron
ENSG00000161513 (FDXR)
ferredoxin reductase 		ENST00000293195 (FDXR-001) 74862497-74873023 protein_coding
ENST00000413947 (FDXR-008) 74862609-74872976 protein_coding
ENST00000420580 (FDXR-009) 74862498-74872974 protein_coding
ENST00000442102 (FDXR-002) 74862542-74873031 protein_coding
ENST00000544854 (FDXR-011) 74862498-74868753 protein_coding
ENST00000577509 (FDXR-010) 74862505-74872968 nonsense_mediated_decay
ENST00000577932 (FDXR-014) 74866512-74872974 retained_intron
ENST00000578473 (FDXR-005) 74862499-74873006 retained_intron
ENST00000579482 (FDXR-007) 74862501-74872976 nonsense_mediated_decay
ENST00000579543 (FDXR-019) 74866181-74872974 nonsense_mediated_decay
ENST00000579893 (FDXR-012) 74864896-74868631 protein_coding
ENST00000580492 (FDXR-015) 74866131-74872968 nonsense_mediated_decay
ENST00000581219 (FDXR-013) 74866209-74872977 protein_coding
ENST00000581530 (FDXR-018) 74862501-74872961 protein_coding
ENST00000581969 (FDXR-017) 74866137-74868473 processed_transcript
ENST00000582710 (FDXR-016) 74864276-74872942 nonsense_mediated_decay
ENST00000582944 (FDXR-006) 74862544-74872985 protein_coding
ENST00000583881 (FDXR-004) 74862497-74873013 nonsense_mediated_decay
ENST00000583917 (FDXR-003) 74862518-74873015 protein_coding
ENST00000610946 (FDXR-020) 74872378-74872974 processed_transcript
CIL_0001FN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020734-ENSMUSG00000018861 CGP 10090 11:115249169-115277050
GeneTranscriptPositionBiotype
ENSMUSG00000018861 (Fdxr)
ferredoxin reductase 		ENSMUST00000021078 (Fdxr-001) 115268024-115277050 protein_coding
ENSMUST00000139437 (Fdxr-003) 115271827-115276724 processed_transcript
ENSMUST00000147500 (Fdxr-004) 115268348-115269014 processed_transcript
ENSMUST00000155130 (Fdxr-002) 115268024-115276914 processed_transcript
ENSMUSG00000020734 (Grin2c)
glutamate receptor, ionotropic, NMDA2C (epsilon 3) 		ENSMUST00000003351 (Grin2c-001) 115249169-115265429 protein_coding
ENSMUST00000106554 (Grin2c-201) 115249169-115267243 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FN_0001ENSG00000161509ENST00000293190ENST00000347612ENST00000578159ENST00000584176ENST00000584496ENSG00000161513ENST00000293195ENST00000413947ENST00000420580ENST00000442102ENST00000544854ENST00000577509ENST00000577932ENST00000578473ENST00000579482ENST00000579543ENST00000579893ENST00000580492ENST00000581219ENST00000581530ENST00000581969ENST00000582710ENST00000582944ENST00000583881ENST00000583917ENST00000610946CIL_0001FN_0002ENSMUSG00000018861ENSMUST00000021078ENSMUST00000139437ENSMUST00000147500ENSMUST00000155130ENSMUSG00000020734ENSMUST00000003351ENSMUST00000106554
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FN_0001ENSG00000161509ENST00000293190ENST00000347612ENST00000584176ENST00000584496ENSG00000161513ENST00000293195ENST00000413947ENST00000420580ENST00000544854ENST00000577509ENST00000578473ENST00000579893ENST00000582710ENST00000582944ENST00000583881ENST00000583917ENST00000610946CIL_0001FN_0002ENSMUSG00000018861ENSMUST00000021078ENSMUST00000139437ENSMUST00000147500ENSMUST00000155130ENSMUSG00000020734ENSMUST00000003351ENSMUST00000106554
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161509 ENST00000293190 N/A N/A N/A 3.320±0.00 0.036±0.00 N/A N/A N/A 0.021±0.00 N/A N/A 0.192±0.11 1.458±0.00 1.340±0.63
ENST00000347612 N/A N/A N/A N/A 0.085±0.00 0.254±0.00 0.217±0.00 N/A N/A N/A N/A 0.123±0.00 0.459±0.05 1.369±0.93
ENST00000578159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584176 0.063±0.00 N/A 0.019±0.00 0.346±0.00 0.042±0.00 0.024±0.00 N/A N/A N/A N/A 0.130±0.00 0.034±0.02 N/A N/A
ENST00000584496 N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A 0.044±0.00 N/A N/A
ENSG00000161513 ENST00000293195 N/A N/A N/A 1.146±0.00 1.983±0.00 1.196±0.00 N/A N/A N/A N/A N/A 32.183±11.58 3.235±0.45 9.106±0.00
ENST00000413947 N/A N/A N/A 0.554±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420580 N/A N/A 0.289±0.00 N/A N/A N/A 0.954±0.00 0.991±0.00 N/A 1.875±0.00 1.661±0.00 N/A N/A N/A
ENST00000442102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544854 N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A
ENST00000577509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.241±0.00 N/A
ENST00000577932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578473 N/A N/A N/A 0.315±0.00 N/A N/A N/A 0.332±0.00 0.176±0.00 N/A N/A N/A N/A 3.224±0.00
ENST00000579482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579893 N/A N/A N/A 1.141±0.00 N/A N/A 0.730±0.00 N/A N/A 0.394±0.00 N/A N/A N/A N/A
ENST00000580492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582710 N/A N/A N/A 0.659±0.54 N/A 0.251±0.00 N/A N/A N/A 0.560±0.00 N/A N/A N/A N/A
ENST00000582944 1.616±0.00 2.449±0.00 N/A 0.127±0.00 N/A 1.978±0.00 N/A 4.536±0.00 3.258±0.00 N/A 4.980±0.00 1.077±0.00 1.730±0.75 10.689±2.93
ENST00000583881 0.954±0.00 N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A 1.311±0.00 N/A N/A 3.193±0.00 6.962±0.00
ENST00000583917 N/A N/A N/A N/A N/A N/A 0.343±0.00 N/A N/A N/A N/A 2.600±0.00 1.400±0.42 8.835±0.00
ENST00000610946 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018861 ENSMUST00000021078 5.742±1.18 690.221±196.58 3.140±0.27 3.779±1.95 8.299±1.78 8.609±1.74 2.453±0.42 5.880±0.69 10.522±1.88 4.453±0.50 1.264±0.20 100.332±39.60 12.752±9.29 8.875±1.53
ENSMUST00000139437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.332±0.05 71.617±0.00 N/A N/A
ENSMUST00000147500 N/A N/A N/A 3.616±0.00 1.464±0.00 N/A N/A N/A N/A N/A N/A 43.507±0.00 N/A N/A
ENSMUST00000155130 N/A N/A N/A 3.498±0.00 N/A N/A N/A N/A N/A N/A 0.321±0.05 88.972±0.00 10.197±1.05 3.460±0.00
ENSMUSG00000020734 ENSMUST00000003351 0.019±0.01 2.878±0.55 0.124±0.06 0.342±0.00 0.103±0.07 0.019±0.01 0.444±0.05 0.113±0.04 0.056±0.03 0.602±0.04 0.022±0.01 1.828±0.45 0.120±0.08 N/A
ENSMUST00000106554 0.035±0.00 2.629±1.69 N/A 5.600±0.00 0.071±0.01 N/A 0.113±0.01 0.074±0.02 0.026±0.01 1.195±0.00 N/A 1.546±0.63 0.058±0.00 0.088±0.00

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