C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unkempt homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021116 Unk-001 ENSMUSG00000020770 10090 + 11:116030322-116061214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021116 4.148±1.10 8.885±1.70 5.886±0.34 20.939±6.01 6.374±1.85 5.803±0.96 2.204±0.75 4.491±1.60 4.192±3.03 8.688±1.17 0.887±0.23 9.270±3.30 6.635±3.40 2.865±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00078R CIL_00078R_0002 CGP 11:116021912-116061214
CIL_00078S CIL_00078S_0002 CGP 11:116030322-116077961

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000586217 UNK-007 nonsense_mediated_decay Homo_sapiens 0 656
ENST00000586527 UNK-002 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000587258 UNK-008 protein_coding Homo_sapiens 0 564
ENST00000587501 UNK-003 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000589666 UNK-001 protein_coding Homo_sapiens 0 3722
ENST00000589790 UNK-004 retained_intron Homo_sapiens 0 254
ENST00000591893 H3F3B-013 retained_intron Homo_sapiens 0 307
ENST00000592629 UNK-006 nonsense_mediated_decay Homo_sapiens 0 579

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