C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1200014J11 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021135 1200014J11Rik-001 ENSMUSG00000020783 10090 + 11:73047783-73080217 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021135
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021135 5.464±1.96 3.196±1.85 4.591±0.46 6.168±1.48 3.172±0.94 3.673±0.66 3.042±0.37 4.095±0.41 4.350±1.76 3.627±1.06 2.273±0.15 5.775±5.54 11.429±7.41 3.383±1.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389005 C17orf85-001 protein_coding Homo_sapiens 0 3094
ENST00000574379 C17orf85-005 retained_intron Homo_sapiens 0 645
ENST00000574911 C17orf85-004 nonsense_mediated_decay Homo_sapiens 0 2093
ENST00000575815 C17orf85-002 retained_intron Homo_sapiens 0 2098
ENST00000577169 C17orf85-003 processed_transcript Homo_sapiens 0 279

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