C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin domain containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021158 Txndc17-001 ENSMUSG00000020803 10090 + 11:72207547-72210015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021158 54.944±7.35 21.363±4.31 56.570±13.61 28.541±14.33 35.142±4.12 61.594±4.63 22.023±3.19 92.148±10.37 34.057±7.30 44.287±1.92 19.667±1.63 42.156±7.70 65.641±26.10 11.626±4.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001B4 CIL_0001B4_0002 CGP 11:72153929-72210015
CIL_0000HF CIL_0000HF_0002 CGP 11:72207547-72215592

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004601 IEA peroxidase activity
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0009055 IEA electron carrier activity
GO:0033209 IEA tumor necrosis factor-mediated signaling pathway
GO:0047134 IEA protein-disulfide reductase activity
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250101 TXNDC17-001 protein_coding Homo_sapiens 0 372
ENST00000446554 RP3-426I6.2-001 processed_pseudogene Homo_sapiens 0 219
ENST00000570330 TXNDC17-010 protein_coding Homo_sapiens 0 265
ENST00000571029 TXNDC17-009 processed_transcript Homo_sapiens 0 268
ENST00000571957 TXNDC17-005 processed_transcript Homo_sapiens 0 302
ENST00000573792 TXNDC17-008 processed_transcript Homo_sapiens 0 267
ENST00000574429 TXNDC17-002 retained_intron Homo_sapiens 6e-18 97
ENST00000574734 TXNDC17-004 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000574838 TXNDC17-006 protein_coding Homo_sapiens 0 202
ENST00000576020 TXNDC17-003 processed_transcript Homo_sapiens 0 267
ENST00000577146 TXNDC17-007 processed_transcript Homo_sapiens 0 265

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