C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001B4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198920-ENSG00000129235 CGP 9606 17:6578148-6644541
GeneTranscriptPositionBiotype
ENSG00000108590 (MED31)
mediator complex subunit 31 		ENST00000225728 (MED31-001) 6643315-6651634 protein_coding
ENST00000574128 (MED31-004) 6644295-6651427 protein_coding
ENST00000575197 (MED31-002) 6644279-6651634 protein_coding
ENST00000575519 (MED31-003) 6649889-6651575 retained_intron
ENSG00000129235 (TXNDC17)
thioredoxin domain containing 17 		ENST00000250101 (TXNDC17-001) 6640758-6644541 protein_coding
ENST00000570330 (TXNDC17-010) 6641016-6643114 protein_coding
ENST00000571029 (TXNDC17-009) 6641658-6643117 processed_transcript
ENST00000571957 (TXNDC17-005) 6641027-6642357 processed_transcript
ENST00000573792 (TXNDC17-008) 6641466-6643120 processed_transcript
ENST00000574429 (TXNDC17-002) 6641024-6643123 retained_intron
ENST00000574734 (TXNDC17-004) 6641034-6643116 nonsense_mediated_decay
ENST00000574838 (TXNDC17-006) 6641043-6643429 protein_coding
ENST00000576020 (TXNDC17-003) 6640985-6643067 processed_transcript
ENST00000577146 (TXNDC17-007) 6641308-6643119 processed_transcript
ENSG00000198920 (KIAA0753)
KIAA0753 		ENST00000361413 (KIAA0753-001) 6578151-6640927 protein_coding
ENST00000542826 (KIAA0753-004) 6579654-6620907 nonsense_mediated_decay
ENST00000570455 (KIAA0753-007) 6634741-6640652 retained_intron
ENST00000570790 (KIAA0753-003) 6579211-6635173 nonsense_mediated_decay
ENST00000571642 (KIAA0753-005) 6628573-6640662 protein_coding
ENST00000572235 (KIAA0753-009) 6620930-6628282 nonsense_mediated_decay
ENST00000572370 (KIAA0753-002) 6579389-6640711 protein_coding
ENST00000573033 (KIAA0753-006) 6628619-6636428 protein_coding
ENST00000575027 (KIAA0753-010) 6589807-6606928 processed_transcript
ENST00000576281 (KIAA0753-011) 6578148-6594999 protein_coding
ENST00000576823 (KIAA0753-008) 6623937-6628487 processed_transcript
CIL_0001B4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020807-ENSMUSG00000020803 CGP 10090 11:72153929-72210015
GeneTranscriptPositionBiotype
ENSMUSG00000020803 (Txndc17)
thioredoxin domain containing 17 		ENSMUST00000021158 (Txndc17-001) 72207547-72210015 protein_coding
ENSMUST00000128648 (Txndc17-002) 72207615-72208677 retained_intron
ENSMUSG00000020807 (4933427D14Rik)
RIKEN cDNA 4933427D14 gene 		ENSMUST00000108505 (4933427D14Rik-003) 72195375-72207431 protein_coding
ENSMUST00000108506 (4933427D14Rik-001) 72154097-72203771 protein_coding
ENSMUST00000131546 (4933427D14Rik-002) 72153930-72207267 nonsense_mediated_decay
ENSMUST00000142530 (4933427D14Rik-004) 72153929-72207459 nonsense_mediated_decay
ENSMUST00000144553 (4933427D14Rik-006) 72198610-72202612 processed_transcript
ENSMUST00000151411 (4933427D14Rik-008) 72153929-72155303 processed_transcript
ENSMUST00000154093 (4933427D14Rik-005) 72198363-72207220 processed_transcript
ENSMUST00000156696 (4933427D14Rik-007) 72155393-72175238 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001B4_0001ENSG00000108590ENST00000225728ENST00000574128ENST00000575197ENST00000575519ENSG00000129235ENST00000250101ENST00000570330ENST00000571029ENST00000571957ENST00000573792ENST00000574429ENST00000574734ENST00000574838ENST00000576020ENST00000577146ENSG00000198920ENST00000361413ENST00000542826ENST00000570455ENST00000570790ENST00000571642ENST00000572235ENST00000572370ENST00000573033ENST00000575027ENST00000576281ENST00000576823CIL_0001B4_0002ENSMUSG00000020803ENSMUST00000021158ENSMUST00000128648ENSMUSG00000020807ENSMUST00000108505ENSMUST00000108506ENSMUST00000131546ENSMUST00000142530ENSMUST00000144553ENSMUST00000151411ENSMUST00000154093ENSMUST00000156696
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001B4_0001ENSG00000108590ENST00000225728ENST00000574128ENST00000575197ENSG00000129235ENST00000250101ENST00000570330ENST00000571957ENST00000574734ENST00000574838ENST00000576020ENSG00000198920ENST00000361413ENST00000570790ENST00000572370ENST00000576823CIL_0001B4_0002ENSMUSG00000020803ENSMUST00000021158ENSMUST00000128648ENSMUSG00000020807ENSMUST00000108505ENSMUST00000108506ENSMUST00000131546ENSMUST00000142530
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108590 ENST00000225728 N/A 3.141±0.00 N/A 5.873±0.28 1.953±0.00 2.004±0.00 1.659±0.66 2.600±0.64 N/A N/A 1.038±0.00 4.274±0.97 N/A N/A
ENST00000574128 N/A N/A N/A N/A N/A N/A 5.999±0.00 N/A N/A 7.021±0.00 3.468±0.00 N/A N/A N/A
ENST00000575197 4.439±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 9.403±0.00 N/A N/A N/A N/A
ENST00000575519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000129235 ENST00000250101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.471±0.00 N/A N/A
ENST00000570330 9.577±0.00 14.351±0.00 N/A N/A 14.499±0.00 12.372±0.00 N/A 21.739±0.00 39.620±0.00 N/A 4.639±0.00 27.078±1.11 24.764±4.52 29.971±0.00
ENST00000571029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571957 9.887±0.00 19.010±0.00 N/A N/A 16.240±0.00 20.353±0.00 15.492±0.00 28.165±8.02 48.624±0.00 N/A 15.671±0.00 30.208±0.00 39.272±2.35 N/A
ENST00000573792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.534±0.00 N/A N/A
ENST00000574838 N/A N/A N/A 6.412±0.00 N/A N/A N/A N/A N/A N/A 3.291±0.00 N/A N/A N/A
ENST00000576020 N/A N/A N/A N/A N/A N/A 11.738±0.00 N/A N/A N/A N/A N/A 20.466±0.00 N/A
ENST00000577146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198920 ENST00000361413 N/A N/A N/A 1.664±0.00 1.515±0.00 1.068±0.00 N/A 1.478±0.00 0.872±0.00 1.951±0.07 N/A 3.043±0.94 1.293±0.19 4.592±0.32
ENST00000542826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570790 N/A N/A N/A N/A N/A 1.569±0.00 0.460±0.00 N/A 1.773±0.00 2.149±0.00 N/A N/A N/A N/A
ENST00000571642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.741±0.00 1.850±0.00 11.859±0.00
ENST00000573033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576823 N/A N/A 5.580±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020803 ENSMUST00000021158 54.944±7.35 21.363±4.31 56.570±13.61 28.541±14.33 35.142±4.12 61.594±4.63 22.023±3.19 92.148±10.37 34.057±7.30 44.287±1.92 19.667±1.63 42.156±7.70 65.641±26.10 11.626±4.23
ENSMUST00000128648 N/A N/A N/A 3.453±0.00 N/A N/A N/A N/A N/A N/A N/A 7.754±0.00 N/A 1.924±0.00
ENSMUSG00000020807 ENSMUST00000108505 N/A 2.627±0.71 N/A N/A 1.802±0.07 1.390±0.14 0.561±0.00 0.842±0.00 N/A 2.207±0.35 N/A 3.650±1.22 N/A N/A
ENSMUST00000108506 0.779±0.14 N/A 0.786±0.00 4.191±1.52 N/A N/A N/A N/A 0.377±0.17 0.475±0.06 0.104±0.02 1.438±0.72 0.674±0.22 N/A
ENSMUST00000131546 1.217±0.04 0.869±0.20 1.210±0.00 2.387±0.67 1.241±0.00 0.699±0.24 0.237±0.06 0.652±0.30 0.370±0.20 N/A 0.160±0.00 2.378±0.81 0.767±0.34 4.469±0.45
ENSMUST00000142530 1.593±0.85 0.763±0.00 3.074±0.02 4.995±0.67 0.578±0.23 1.088±0.62 0.405±0.00 2.017±0.71 0.657±0.25 1.349±0.91 0.162±0.01 1.976±1.24 1.474±0.00 2.786±0.94
ENSMUST00000144553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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