C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: L-2-hydroxyglutarate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021370 L2hgdh-201 ENSMUSG00000020988 10090 - 12:69690436-69724874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021370
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021370 4.462±1.24 7.668±0.47 5.282±0.82 2.964±0.64 4.327±0.84 3.729±1.64 10.524±1.68 22.132±1.71 12.310±4.89 2.620±0.75 11.953±0.77 6.850±3.09 2.982±1.14 5.442±1.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HL CIL_0005HL_0003 CGP 12:69583762-69724874
CIL_0005HM CIL_0005HM_0003 CGP 12:69690436-69744658

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 ISS mitochondrion
GO:0016021 ISS integral component of membrane
GO:0044267 ISS cellular protein metabolic process
GO:0047545 ISS 2-hydroxyglutarate dehydrogenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261699 L2HGDH-002 protein_coding Homo_sapiens 0 1227
ENST00000267436 L2HGDH-001 protein_coding Homo_sapiens 0 1395
ENST00000421284 L2HGDH-003 protein_coding Homo_sapiens 0 1395
ENST00000554191 L2HGDH-005 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000555423 L2HGDH-004 protein_coding Homo_sapiens 0 702
ENST00000555610 L2HGDH-007 protein_coding Homo_sapiens 0 501

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