C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: L-2-hydroxyglutarate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267436 L2HGDH-001 ENSG00000087299 9606 - 14:50242434-50312548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267436 0.795±0.00 1.629±0.00 0.690±0.00 1.601±0.00 1.247±0.00 0.586±0.00 0.874±0.58 1.728±1.00 0.913±0.00 0.394±0.00 1.118±0.00 0.520±0.00 1.236±0.00 1.947±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HL CIL_0005HL_0002 CGP 14:50117120-50312548
CIL_0005HM CIL_0005HM_0002 CGP 14:50237563-50335558

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006103 TAS 2-oxoglutarate metabolic process
GO:0016021 IDA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0031305 NAS integral component of mitochondrial inner membrane
GO:0044237 TAS cellular metabolic process
GO:0044267 IDA cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0047545 IDA 2-hydroxyglutarate dehydrogenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021370 L2hgdh-201 protein_coding Mus_musculus 0 1395
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.000003 60
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.000003 60
ENSMUST00000053760 Utp14b-001 protein_coding Mus_musculus 0.0004 53

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