C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hedgehog interacting protein-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021685 Hhipl1-201 ENSMUSG00000021260 10090 + 12:108306270-108328300 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000021685
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000021685 1.099±0.02 0.345±0.13 0.505±0.00 1.287±0.76 0.559±0.35 0.505±0.24 0.352±0.19 0.135±0.04 0.088±0.06 0.251±0.00 0.205±0.12 0.839±0.46 1.963±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0002 VISTA 12:107949271-108552884
CIL_0001A9 CIL_0001A9_0003 CGP 12:108206345-108328300
CIL_0003HF CIL_0003HF_0002 CGP 12:108306270-108362231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0005576 IEA extracellular region
GO:0005975 IEA carbohydrate metabolic process
GO:0006898 IEA receptor-mediated endocytosis
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016901 IEA oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
GO:0048038 IEA quinone binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330710 HHIPL1-001 protein_coding Homo_sapiens 0 2106
ENST00000357223 HHIPL1-002 protein_coding Homo_sapiens 0 1688

Loading