C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001A9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005232-ENSDARG00000005232 CGP 7955 17:17744522-17855844
GeneTranscriptPositionBiotype
ENSDARG00000005232 (ccdc85ca)
coiled-coil domain containing 85C, a
ENSDART00000104999 (ccdc85ca-001) 17785216-17855844 protein_coding
ENSDART00000151896 (ccdc85ca-002) 17744632-17855353 processed_transcript
ENSDART00000152045 (ccdc85ca-003) 17744522-17750753 processed_transcript
ENSDARG00000062501 (hhipl1)
HHIP-like 1
ENSDART00000090447 (hhipl1-001) 17769248-17778740 protein_coding
CIL_0001A9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205476-ENSG00000182218 CGP 9606 14:99500180-99680569
GeneTranscriptPositionBiotype
ENSG00000182218 (HHIPL1)
HHIP-like 1
ENST00000330710 (HHIPL1-001) 99645110-99680569 protein_coding
ENST00000357223 (HHIPL1-002) 99645143-99669277 protein_coding
ENSG00000200506 (Y_RNA)
Y RNA
ENST00000363636 (Y_RNA.1-356) 99583017-99583118 misc_RNA
ENSG00000205476 (CCDC85C)
coiled-coil domain containing 85C
ENST00000380243 (CCDC85C-001) 99500180-99604026 protein_coding
ENST00000554877 (CCDC85C-004) 99515300-99576592 protein_coding
ENST00000554996 (CCDC85C-003) 99515200-99580126 protein_coding
ENST00000555822 (CCDC85C-007) 99515087-99522945 protein_coding
ENST00000556348 (CCDC85C-005) 99516265-99572975 protein_coding
ENST00000557576 (CCDC85C-006) 99514961-99536088 protein_coding
ENST00000557769 (CCDC85C-002) 99512032-99522563 protein_coding
ENSG00000247970 (RP11-543C4.1)
ENST00000502101 (RP11-543C4.1-001) 99604556-99625740 lincRNA
ENSG00000258749 (RP11-688G15.3)
ENST00000557733 (RP11-688G15.3-001) 99512501-99513576 antisense
CIL_0001A9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000084883-ENSMUSG00000021260 CGP 10090 12:108206345-108328300
GeneTranscriptPositionBiotype
ENSMUSG00000021260 (Hhipl1)
hedgehog interacting protein-like 1
ENSMUST00000021685 (Hhipl1-201) 108306270-108328300 protein_coding
ENSMUSG00000084883 (Ccdc85c)
coiled-coil domain containing 85C
ENSMUST00000136175 (Ccdc85c-201) 108206345-108275417 protein_coding
ENSMUSG00000097847 (4930478K11Rik)
RIKEN cDNA 4930478K11 gene
ENSMUST00000181875 (4930478K11Rik-201) 108313779-108328030 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001A9_0001ENSDARG00000005232ENSDART00000104999ENSDART00000151896ENSDART00000152045ENSDARG00000062501ENSDART00000090447CIL_0001A9_0002ENSG00000182218ENST00000330710ENST00000357223ENSG00000200506ENST00000363636ENSG00000205476ENST00000380243ENST00000554877ENST00000554996ENST00000555822ENST00000556348ENST00000557576ENST00000557769ENSG00000247970ENST00000502101ENSG00000258749ENST00000557733CIL_0001A9_0003ENSMUSG00000021260ENSMUST00000021685ENSMUSG00000084883ENSMUST00000136175ENSMUSG00000097847ENSMUST00000181875
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001A9_0001ENSDARG00000005232ENSDART00000104999ENSDARG00000062501ENSDART00000090447CIL_0001A9_0002ENSG00000182218ENST00000330710ENST00000357223ENSG00000200506ENST00000363636ENSG00000205476ENST00000380243ENST00000557769ENSG00000247970ENST00000502101ENSG00000258749ENST00000557733CIL_0001A9_0003ENSMUSG00000021260ENSMUST00000021685ENSMUSG00000084883ENSMUST00000136175ENSMUSG00000097847ENSMUST00000181875
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005232 ENSDART00000104999 N/A N/A N/A 11.573±3.45 N/A N/A 8.481±4.20 2.134±0.75 0.022±0.00 N/A 1.408±0.00 N/A N/A N/A
ENSDART00000151896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000062501 ENSDART00000090447 N/A N/A N/A 19.027±1.38 N/A N/A 13.517±7.86 15.468±4.96 7.694±0.00 N/A 2.860±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182218 ENST00000330710 0.266±0.00 1.222±0.00 N/A 1.289±0.88 0.302±0.10 0.242±0.21 0.189±0.13 0.266±0.01 0.133±0.04 0.179±0.10 0.049±0.03 0.555±0.32 0.469±0.05 0.235±0.00
ENST00000357223 0.380±0.00 N/A N/A N/A 0.495±0.00 0.115±0.00 N/A N/A 0.481±0.00 N/A 0.036±0.00 N/A 0.766±0.12 N/A
ENSG00000200506 ENST00000363636 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A
ENSG00000205476 ENST00000380243 1.105±0.00 0.935±0.00 0.277±0.00 0.905±0.79 1.141±0.00 1.105±0.73 0.850±0.73 1.192±0.91 0.735±0.42 3.066±0.00 1.659±0.00 1.703±0.89 1.812±0.37 2.881±1.32
ENST00000554877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557769 N/A N/A 0.812±0.00 2.412±1.37 N/A 7.766±0.00 3.343±2.75 4.481±0.00 5.648±0.00 N/A 0.364±0.00 3.596±0.00 4.320±1.24 N/A
ENSG00000247970 ENST00000502101 0.041±0.00 0.295±0.00 0.140±0.00 0.246±0.20 0.221±0.05 N/A 0.020±0.00 N/A 0.019±0.00 0.305±0.00 N/A 0.090±0.05 0.094±0.03 0.542±0.18
ENSG00000258749 ENST00000557733 N/A N/A N/A N/A N/A 19.756±0.00 16.936±0.00 N/A 16.176±0.00 N/A N/A 15.020±0.00 9.445±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021260 ENSMUST00000021685 1.099±0.02 0.345±0.13 0.505±0.00 1.287±0.76 0.559±0.35 0.505±0.24 0.352±0.19 0.135±0.04 0.088±0.06 0.251±0.00 0.205±0.12 0.839±0.46 1.963±0.86 N/A
ENSMUSG00000084883 ENSMUST00000136175 N/A 6.112±0.00 7.640±0.00 40.469±22.93 0.437±0.00 N/A N/A N/A 1.568±1.50 N/A N/A 7.121±6.92 20.749±10.10 8.978±0.65
ENSMUSG00000097847 ENSMUST00000181875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.937±0.19

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