C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021793 Elovl2-001 ENSMUSG00000021364 10090 - 13:41182495-41220405 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021793
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021793 0.097±0.07 0.087±0.04 0.051±0.02 9.412±5.92 0.207±0.16 0.028±0.01 0.034±0.02 19.066±2.24 85.346±51.55 0.046±0.02 0.013±0.01 0.915±0.24 2.032±2.60 19.572±6.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015T CIL_00015T_0003 CGP 13:41114307-41220405
CIL_000384 CIL_000384_0002 CGP 13:41182495-41276574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 IDA very long-chain fatty acid metabolic process
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0006636 IEA unsaturated fatty acid biosynthetic process
GO:0009922 IDA fatty acid elongase activity
GO:0016021 IEA integral component of membrane
GO:0016747 IDA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0034626 IDA fatty acid elongation, polyunsaturated fatty acid
GO:0042761 IDA very long-chain fatty acid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354666 ELOVL2-001 protein_coding Homo_sapiens 0 874

Loading