C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, mannose-binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021940 Lman2-201 ENSMUSG00000021484 10090 - 13:55343833-55362783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021940
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021940 49.640±23.89 67.797±10.94 30.719±1.40 12.378±4.57 60.253±3.92 64.909±4.96 23.728±0.83 53.760±4.16 51.919±22.39 40.672±4.85 15.191±0.47 62.874±19.27 57.095±16.50 17.537±7.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0002 VISTA 13:55104361-55707564
CIL_0002YL CIL_0002YL_0002 CGP 13:55343833-55384687

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001948 IEA glycoprotein binding
GO:0005537 IEA mannose binding
GO:0005615 IEA extracellular space
GO:0005793 IEA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0005887 IEA integral component of plasma membrane
GO:0006890 IEA retrograde vesicle-mediated transport, Golgi to ER
GO:0009986 IEA cell surface
GO:0015031 IEA protein transport
GO:0030246 IEA carbohydrate binding
GO:0031072 IEA heat shock protein binding
GO:0046872 IEA metal ion binding
GO:0050766 IMP positive regulation of phagocytosis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303127 LMAN2-001 protein_coding Homo_sapiens 0 1517
ENST00000502560 LMAN2-005 protein_coding Homo_sapiens 0 948
ENST00000502721 LMAN2-003 retained_intron Homo_sapiens 0 538
ENST00000506310 LMAN2-004 processed_transcript Homo_sapiens 0 627
ENST00000513877 LMAN2-002 protein_coding Homo_sapiens 0 793
ENST00000514458 LMAN2-007 protein_coding Homo_sapiens 0 616
ENST00000515209 LMAN2-008 protein_coding Homo_sapiens 0 1099

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