C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin domain containing 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021959 Txndc15-201 ENSMUSG00000021497 10090 + 13:55714650-55726221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021959
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021959 32.228±6.17 51.847±4.54 21.376±2.12 35.577±13.07 23.425±8.59 25.398±4.51 10.154±3.17 26.223±2.43 28.069±16.55 23.372±2.65 16.993±1.08 37.906±7.04 30.130±10.09 4.091±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AP CIL_0009AP_0002 VISTA 13:55516415-56118354
CIL_0005XT CIL_0005XT_0002 CGP 13:55693124-55726221
CIL_0005XS CIL_0005XS_0002 CGP 13:55714650-55776830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358387 TXNDC15-001 protein_coding Homo_sapiens 0 774
ENST00000505174 TXNDC15-003 retained_intron Homo_sapiens 0 614
ENST00000507024 TXNDC15-005 nonsense_mediated_decay Homo_sapiens 0 704
ENST00000508779 TXNDC15-004 protein_coding Homo_sapiens 0 706
ENST00000511070 TXNDC15-002 nonsense_mediated_decay Homo_sapiens 0 610

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