C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25, member 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021971 Slc25a48-001 ENSMUSG00000021509 10090 + 13:56438355-56474239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021971
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021971 8.512±7.28 0.363±0.18 7.215±0.42 0.047±0.01 0.761±0.25 0.393±0.10 0.101±0.03 6.388±0.46 1.680±1.10 0.177±0.05 0.019±0.01 9.457±3.34 8.435±5.83 0.186±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083J CIL_00083J_0002 VISTA 13:55859018-56461187
CIL_0005XZ CIL_0005XZ_0002 CGP 13:56438355-56482246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274513 SLC25A48-001 protein_coding Homo_sapiens 0 641
ENST00000412661 SLC25A48-003 protein_coding Homo_sapiens 0 451
ENST00000425402 SLC25A48-002 protein_coding Homo_sapiens 1.99965e-42 178
ENST00000433282 SLC25A48-005 protein_coding Homo_sapiens 0 911
ENST00000462340 SLC25A48-004 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000510147 SLC25A48-008 processed_transcript Homo_sapiens 2e-22 110

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