C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00083J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1473 VISTA 9606 5:135133909-135736454
GeneTranscriptPositionBiotype
ENSG00000113648 (H2AFY)
H2A histone family, member Y 		ENST00000304332 (H2AFY-004) 135334383-135399887 protein_coding
ENST00000312469 (H2AFY-002) 135334410-135399211 protein_coding
ENST00000360597 (H2AFY-008) 135334417-135399222 processed_transcript
ENST00000423969 (H2AFY-003) 135334856-135399229 protein_coding
ENST00000451949 (H2AFY-010) 135334381-135351544 processed_transcript
ENST00000504197 (H2AFY-007) 135360416-135370146 retained_intron
ENST00000505827 (H2AFY-023) 135335101-135345987 retained_intron
ENST00000506218 (H2AFY-014) 135369481-135399214 retained_intron
ENST00000506532 (H2AFY-019) 135369368-135399914 processed_transcript
ENST00000506671 (H2AFY-006) 135334473-135399238 nonsense_mediated_decay
ENST00000507868 (H2AFY-017) 135350814-135399204 retained_intron
ENST00000508120 (H2AFY-021) 135360519-135399206 processed_transcript
ENST00000508785 (H2AFY-015) 135359397-135399177 processed_transcript
ENST00000508962 (H2AFY-012) 135388917-135399887 processed_transcript
ENST00000510038 (H2AFY-005) 135334913-135399884 protein_coding
ENST00000511494 (H2AFY-011) 135334435-135347606 retained_intron
ENST00000511689 (H2AFY-001) 135333900-135399622 protein_coding
ENST00000512507 (H2AFY-009) 135334381-135362901 processed_transcript
ENST00000513210 (H2AFY-016) 135359722-135389059 processed_transcript
ENST00000513268 (H2AFY-018) 135345690-135350955 retained_intron
ENSG00000145824 (CXCL14)
chemokine (C-X-C motif) ligand 14 		ENST00000337225 (CXCL14-201) 135570683-135579279 protein_coding
ENST00000512158 (CXCL14-001) 135570679-135579064 protein_coding
ENSG00000181965 (NEUROG1)
neurogenin 1 		ENST00000314744 (NEUROG1-001) 135534282-135535949 protein_coding
ENSG00000248753 (CTC-276P9.2)
 ENST00000507058 (CTC-276P9.2-001) 135120526-135139681 lincRNA
ENSG00000249639 (CTB-138E5.1)
 ENST00000510230 (CTB-138E5.1-001) 135450613-135458697 antisense
ENSG00000249647 (C5orf66-AS2)
C5orf66 antisense RNA 2 		ENST00000505663 (C5orf66-AS2-001) 135236234-135248179 lincRNA
ENST00000555344 (C5orf66-AS2-002) 135247046-135247815 lincRNA
ENSG00000251045 (CTC-321K16.4)
 ENST00000508452 (CTC-321K16.4-001) 135648584-135653935 lincRNA
ENSG00000251380 (DCANP1)
dendritic cell-associated nuclear protein 		ENST00000503143 (DCANP1-001) 135444214-135447348 protein_coding
ENSG00000255833 (TIFAB)
TRAF-interacting protein with forkhead-associated domain, family member B 		ENST00000537858 (TIFAB-001) 135444218-135452399 protein_coding
ENSG00000270021 (CTC-203F4.2)
 ENST00000602502 (CTC-203F4.2-001) 135399280-135401296 antisense
CIL_00083J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1473 VISTA 10090 13:55859018-56461187
GeneTranscriptPositionBiotype
ENSMUSG00000015937 (H2afy)
H2A histone family, member Y 		ENSMUST00000016081 (H2afy-001) 56073619-56135631 protein_coding
ENSMUST00000045788 (H2afy-002) 56073619-56135631 protein_coding
ENSMUST00000137835 (H2afy-008) 56074166-56084521 retained_intron
ENSMUST00000139511 (H2afy-003) 56095556-56135530 processed_transcript
ENSMUST00000141031 (H2afy-004) 56100889-56135440 retained_intron
ENSMUST00000141589 (H2afy-007) 56074359-56090058 retained_intron
ENSMUST00000154564 (H2afy-006) 56104441-56134825 processed_transcript
ENSMUST00000154778 (H2afy-005) 56104430-56136361 processed_transcript
ENSMUSG00000021508 (Cxcl14)
chemokine (C-X-C motif) ligand 14 		ENSMUST00000021970 (Cxcl14-201) 56288647-56296551 protein_coding
ENSMUSG00000021509 (Slc25a48)
solute carrier family 25, member 48 		ENSMUST00000021971 (Slc25a48-001) 56438355-56474239 protein_coding
ENSMUSG00000048904 (Neurog1)
neurogenin 1 		ENSMUST00000058475 (Neurog1-201) 56250505-56252163 protein_coding
ENSMUSG00000049625 (Tifab)
TRAF-interacting protein with forkhead-associated domain, family member B 		ENSMUST00000169652 (Tifab-201) 56173703-56178885 protein_coding
ENSMUSG00000074885 (Gm10782)
predicted gene 10782 		ENSMUST00000099476 (Gm10782-201) 56362901-56365769 protein_coding
ENSMUSG00000097361 (4930550C17Rik)
RIKEN cDNA 4930550C17 gene 		ENSMUST00000181629 (4930550C17Rik-201) 56222224-56243940 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00083J_0001ENSG00000113648ENST00000304332ENST00000312469ENST00000423969ENST00000451949ENST00000505827ENST00000510038ENST00000511494ENST00000511689ENST00000512507ENSG00000145824ENST00000337225ENST00000512158ENSG00000181965ENST00000314744ENSG00000248753ENST00000507058ENSG00000249639ENST00000510230ENSG00000249647ENST00000505663ENST00000555344ENSG00000251045ENST00000508452ENSG00000251380ENST00000503143ENSG00000255833ENST00000537858ENSG00000270021ENST00000602502CIL_00083J_0002ENSMUSG00000015937ENSMUST00000016081ENSMUST00000045788ENSMUST00000139511ENSMUST00000141589ENSMUST00000154564ENSMUSG00000021508ENSMUST00000021970ENSMUSG00000021509ENSMUST00000021971ENSMUSG00000048904ENSMUST00000058475ENSMUSG00000049625ENSMUST00000169652ENSMUSG00000074885ENSMUST00000099476ENSMUSG00000097361ENSMUST00000181629
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113648 ENST00000304332 25.814±0.00 23.118±0.00 N/A 8.655±5.04 13.683±0.00 21.380±0.00 N/A 14.563±11.60 4.941±0.00 14.802±0.00 N/A 30.223±4.34 32.436±18.13 19.977±0.00
ENST00000312469 24.415±0.00 20.087±0.00 1.516±0.00 16.599±11.86 11.402±0.00 31.171±0.00 20.350±17.56 27.604±0.00 6.798±1.43 17.475±11.17 19.731±14.14 24.113±7.34 27.030±8.43 18.087±5.72
ENST00000360597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423969 49.447±0.00 34.342±0.00 N/A 38.909±0.00 26.787±0.00 N/A N/A N/A N/A 36.278±0.00 N/A N/A N/A N/A
ENST00000451949 N/A N/A N/A N/A 5.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505827 N/A N/A 1.216±0.00 N/A N/A N/A 1.691±0.00 1.112±0.00 3.018±0.00 N/A 1.732±0.00 N/A N/A N/A
ENST00000506218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510038 N/A N/A 2.222±0.00 N/A 8.097±0.00 N/A N/A N/A N/A N/A N/A 24.722±7.60 15.303±0.00 N/A
ENST00000511494 N/A N/A N/A N/A N/A 6.501±0.00 N/A 1.453±0.00 N/A N/A N/A N/A N/A N/A
ENST00000511689 N/A N/A N/A N/A N/A N/A N/A 1.303±0.00 N/A N/A N/A 10.433±0.00 N/A N/A
ENST00000512507 N/A 1.963±0.00 1.112±0.00 0.605±0.00 1.912±0.80 1.433±0.00 1.008±0.00 0.634±0.00 2.088±0.00 1.726±0.00 N/A 4.091±0.00 N/A N/A
ENST00000513210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145824 ENST00000337225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.420±0.00
ENST00000512158 22.989±0.00 134.985±0.00 19.893±0.00 14.995±7.79 44.913±31.25 26.161±13.14 4.775±4.48 62.607±58.36 6.243±0.58 11.585±9.72 15.089±11.96 7.038±4.84 56.835±19.63 23.778±21.39
ENSG00000181965 ENST00000314744 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.240±0.00
ENSG00000248753 ENST00000507058 N/A N/A N/A N/A 0.762±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.152±0.00
ENSG00000249639 ENST00000510230 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00 N/A N/A 0.268±0.14 0.356±0.02
ENSG00000249647 ENST00000505663 N/A 0.028±0.00 N/A N/A 0.116±0.00 0.009±0.00 N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.023±0.00
ENST00000555344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.464±0.00
ENSG00000251045 ENST00000508452 N/A N/A 1.023±0.00 0.039±0.00 0.020±0.00 0.146±0.00 0.054±0.00 0.040±0.00 0.107±0.00 0.169±0.00 N/A 0.007±0.00 N/A 0.055±0.00
ENSG00000251380 ENST00000503143 0.011±0.00 0.114±0.00 N/A 0.012±0.00 0.136±0.03 N/A 0.011±0.00 N/A 0.073±0.00 0.005±0.00 0.098±0.00 0.067±0.00 0.040±0.02 N/A
ENSG00000255833 ENST00000537858 N/A 0.212±0.00 N/A N/A 0.051±0.01 0.081±0.06 0.005±0.00 N/A 0.005±0.00 0.121±0.00 0.171±0.00 0.026±0.01 0.015±0.00 0.073±0.03
ENSG00000270021 ENST00000602502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.638±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015937 ENSMUST00000016081 12.337±0.42 N/A 14.721±0.06 68.528±5.22 5.673±1.37 6.495±0.62 N/A 8.127±1.62 12.899±7.40 8.048±0.56 N/A 20.768±8.91 14.001±7.64 9.838±4.86
ENSMUST00000045788 9.913±5.14 9.223±1.94 30.014±1.71 N/A 13.149±3.43 10.767±1.93 4.415±0.59 15.417±3.19 9.882±3.45 16.693±2.67 15.056±4.44 11.878±3.16 7.971±0.43 N/A
ENSMUST00000137835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139511 17.188±7.35 66.140±11.58 27.950±0.00 38.309±4.12 56.278±10.58 62.535±10.57 N/A 20.678±3.11 21.167±5.76 30.978±8.54 11.323±0.00 62.972±10.05 19.464±6.64 19.026±0.00
ENSMUST00000141031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141589 N/A N/A N/A 103.503±0.00 N/A N/A N/A N/A N/A N/A N/A 202.842±0.00 93.000±30.64 62.327±0.00
ENSMUST00000154564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.590±1.34
ENSMUST00000154778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021508 ENSMUST00000021970 55.995±46.22 16.610±5.04 171.554±32.91 13.484±2.56 54.276±15.25 19.883±3.66 7.143±0.20 23.636±2.49 0.602±0.52 131.498±3.39 14.506±2.35 95.025±42.42 1.018±0.75 1.752±1.65
ENSMUSG00000021509 ENSMUST00000021971 8.512±7.28 0.363±0.18 7.215±0.42 0.047±0.01 0.761±0.25 0.393±0.10 0.101±0.03 6.388±0.46 1.680±1.10 0.177±0.05 0.019±0.01 9.457±3.34 8.435±5.83 0.186±0.11
ENSMUSG00000048904 ENSMUST00000058475 N/A N/A N/A 3.578±2.59 0.016±0.00 N/A N/A N/A 0.007±0.00 N/A N/A N/A 0.007±0.00 0.484±0.14
ENSMUSG00000049625 ENSMUST00000169652 2.361±0.58 2.995±0.37 0.782±0.54 0.221±0.13 3.508±1.36 2.263±0.19 0.496±0.10 0.984±0.12 1.582±1.00 4.618±0.82 0.147±0.11 1.429±0.52 0.200±0.15 0.090±0.05
ENSMUSG00000074885 ENSMUST00000099476 N/A N/A 0.076±0.02 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A
ENSMUSG00000097361 ENSMUST00000181629 N/A N/A N/A N/A N/A N/A 0.019±0.00 0.020±0.00 N/A N/A N/A N/A N/A 0.318±0.18

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