C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00083J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1473 VISTA 9606 5:135133909-135736454
GeneTranscriptPositionBiotype
ENSG00000113648 (H2AFY)
H2A histone family, member Y 		ENST00000304332 (H2AFY-004) 135334383-135399887 protein_coding
ENST00000312469 (H2AFY-002) 135334410-135399211 protein_coding
ENST00000360597 (H2AFY-008) 135334417-135399222 processed_transcript
ENST00000423969 (H2AFY-003) 135334856-135399229 protein_coding
ENST00000451949 (H2AFY-010) 135334381-135351544 processed_transcript
ENST00000504197 (H2AFY-007) 135360416-135370146 retained_intron
ENST00000505827 (H2AFY-023) 135335101-135345987 retained_intron
ENST00000506218 (H2AFY-014) 135369481-135399214 retained_intron
ENST00000506532 (H2AFY-019) 135369368-135399914 processed_transcript
ENST00000506671 (H2AFY-006) 135334473-135399238 nonsense_mediated_decay
ENST00000507868 (H2AFY-017) 135350814-135399204 retained_intron
ENST00000508120 (H2AFY-021) 135360519-135399206 processed_transcript
ENST00000508785 (H2AFY-015) 135359397-135399177 processed_transcript
ENST00000508962 (H2AFY-012) 135388917-135399887 processed_transcript
ENST00000510038 (H2AFY-005) 135334913-135399884 protein_coding
ENST00000511494 (H2AFY-011) 135334435-135347606 retained_intron
ENST00000511689 (H2AFY-001) 135333900-135399622 protein_coding
ENST00000512507 (H2AFY-009) 135334381-135362901 processed_transcript
ENST00000513210 (H2AFY-016) 135359722-135389059 processed_transcript
ENST00000513268 (H2AFY-018) 135345690-135350955 retained_intron
ENSG00000145824 (CXCL14)
chemokine (C-X-C motif) ligand 14 		ENST00000337225 (CXCL14-201) 135570683-135579279 protein_coding
ENST00000512158 (CXCL14-001) 135570679-135579064 protein_coding
ENSG00000181965 (NEUROG1)
neurogenin 1 		ENST00000314744 (NEUROG1-001) 135534282-135535949 protein_coding
ENSG00000248753 (CTC-276P9.2)
 ENST00000507058 (CTC-276P9.2-001) 135120526-135139681 lincRNA
ENSG00000249639 (CTB-138E5.1)
 ENST00000510230 (CTB-138E5.1-001) 135450613-135458697 antisense
ENSG00000249647 (C5orf66-AS2)
C5orf66 antisense RNA 2 		ENST00000505663 (C5orf66-AS2-001) 135236234-135248179 lincRNA
ENST00000555344 (C5orf66-AS2-002) 135247046-135247815 lincRNA
ENSG00000251045 (CTC-321K16.4)
 ENST00000508452 (CTC-321K16.4-001) 135648584-135653935 lincRNA
ENSG00000251380 (DCANP1)
dendritic cell-associated nuclear protein 		ENST00000503143 (DCANP1-001) 135444214-135447348 protein_coding
ENSG00000255833 (TIFAB)
TRAF-interacting protein with forkhead-associated domain, family member B 		ENST00000537858 (TIFAB-001) 135444218-135452399 protein_coding
ENSG00000270021 (CTC-203F4.2)
 ENST00000602502 (CTC-203F4.2-001) 135399280-135401296 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00083J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1473 VISTA 10090 13:55859018-56461187
GeneTranscriptPositionBiotype
ENSMUSG00000015937 (H2afy)
H2A histone family, member Y 		ENSMUST00000016081 (H2afy-001) 56073619-56135631 protein_coding
ENSMUST00000045788 (H2afy-002) 56073619-56135631 protein_coding
ENSMUST00000137835 (H2afy-008) 56074166-56084521 retained_intron
ENSMUST00000139511 (H2afy-003) 56095556-56135530 processed_transcript
ENSMUST00000141031 (H2afy-004) 56100889-56135440 retained_intron
ENSMUST00000141589 (H2afy-007) 56074359-56090058 retained_intron
ENSMUST00000154564 (H2afy-006) 56104441-56134825 processed_transcript
ENSMUST00000154778 (H2afy-005) 56104430-56136361 processed_transcript
ENSMUSG00000021508 (Cxcl14)
chemokine (C-X-C motif) ligand 14 		ENSMUST00000021970 (Cxcl14-201) 56288647-56296551 protein_coding
ENSMUSG00000021509 (Slc25a48)
solute carrier family 25, member 48 		ENSMUST00000021971 (Slc25a48-001) 56438355-56474239 protein_coding
ENSMUSG00000048904 (Neurog1)
neurogenin 1 		ENSMUST00000058475 (Neurog1-201) 56250505-56252163 protein_coding
ENSMUSG00000049625 (Tifab)
TRAF-interacting protein with forkhead-associated domain, family member B 		ENSMUST00000169652 (Tifab-201) 56173703-56178885 protein_coding
ENSMUSG00000074885 (Gm10782)
predicted gene 10782 		ENSMUST00000099476 (Gm10782-201) 56362901-56365769 protein_coding
ENSMUSG00000097361 (4930550C17Rik)
RIKEN cDNA 4930550C17 gene 		ENSMUST00000181629 (4930550C17Rik-201) 56222224-56243940 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00083J_0001ENSG00000113648ENST00000304332ENST00000312469ENST00000360597ENST00000423969ENST00000451949ENST00000504197ENST00000505827ENST00000506218ENST00000506532ENST00000506671ENST00000507868ENST00000508120ENST00000508785ENST00000508962ENST00000510038ENST00000511494ENST00000511689ENST00000512507ENST00000513210ENST00000513268ENSG00000145824ENST00000337225ENST00000512158ENSG00000181965ENST00000314744ENSG00000248753ENST00000507058ENSG00000249639ENST00000510230ENSG00000249647ENST00000505663ENST00000555344ENSG00000251045ENST00000508452ENSG00000251380ENST00000503143ENSG00000255833ENST00000537858ENSG00000270021ENST00000602502CIL_00083J_0002ENSMUSG00000015937ENSMUST00000016081ENSMUST00000045788ENSMUST00000137835ENSMUST00000139511ENSMUST00000141031ENSMUST00000141589ENSMUST00000154564ENSMUST00000154778ENSMUSG00000021508ENSMUST00000021970ENSMUSG00000021509ENSMUST00000021971ENSMUSG00000048904ENSMUST00000058475ENSMUSG00000049625ENSMUST00000169652ENSMUSG00000074885ENSMUST00000099476ENSMUSG00000097361ENSMUST00000181629
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00083J_0001ENSG00000113648ENST00000304332ENST00000312469ENST00000423969ENST00000451949ENST00000505827ENST00000510038ENST00000511494ENST00000511689ENST00000512507ENSG00000145824ENST00000337225ENST00000512158ENSG00000181965ENST00000314744ENSG00000248753ENST00000507058ENSG00000249639ENST00000510230ENSG00000249647ENST00000505663ENST00000555344ENSG00000251045ENST00000508452ENSG00000251380ENST00000503143ENSG00000255833ENST00000537858ENSG00000270021ENST00000602502CIL_00083J_0002ENSMUSG00000015937ENSMUST00000016081ENSMUST00000045788ENSMUST00000139511ENSMUST00000141589ENSMUST00000154564ENSMUSG00000021508ENSMUST00000021970ENSMUSG00000021509ENSMUST00000021971ENSMUSG00000048904ENSMUST00000058475ENSMUSG00000049625ENSMUST00000169652ENSMUSG00000074885ENSMUST00000099476ENSMUSG00000097361ENSMUST00000181629
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113648 ENST00000304332 25.814±0.00 23.118±0.00 N/A 8.655±5.04 13.683±0.00 21.380±0.00 N/A 14.563±11.60 4.941±0.00 14.802±0.00 N/A 30.223±4.34 32.436±18.13 19.977±0.00
ENST00000312469 24.415±0.00 20.087±0.00 1.516±0.00 16.599±11.86 11.402±0.00 31.171±0.00 20.350±17.56 27.604±0.00 6.798±1.43 17.475±11.17 19.731±14.14 24.113±7.34 27.030±8.43 18.087±5.72
ENST00000360597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423969 49.447±0.00 34.342±0.00 N/A 38.909±0.00 26.787±0.00 N/A N/A N/A N/A 36.278±0.00 N/A N/A N/A N/A
ENST00000451949 N/A N/A N/A N/A 5.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505827 N/A N/A 1.216±0.00 N/A N/A N/A 1.691±0.00 1.112±0.00 3.018±0.00 N/A 1.732±0.00 N/A N/A N/A
ENST00000506218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510038 N/A N/A 2.222±0.00 N/A 8.097±0.00 N/A N/A N/A N/A N/A N/A 24.722±7.60 15.303±0.00 N/A
ENST00000511494 N/A N/A N/A N/A N/A 6.501±0.00 N/A 1.453±0.00 N/A N/A N/A N/A N/A N/A
ENST00000511689 N/A N/A N/A N/A N/A N/A N/A 1.303±0.00 N/A N/A N/A 10.433±0.00 N/A N/A
ENST00000512507 N/A 1.963±0.00 1.112±0.00 0.605±0.00 1.912±0.80 1.433±0.00 1.008±0.00 0.634±0.00 2.088±0.00 1.726±0.00 N/A 4.091±0.00 N/A N/A
ENST00000513210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145824 ENST00000337225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.420±0.00
ENST00000512158 22.989±0.00 134.985±0.00 19.893±0.00 14.995±7.79 44.913±31.25 26.161±13.14 4.775±4.48 62.607±58.36 6.243±0.58 11.585±9.72 15.089±11.96 7.038±4.84 56.835±19.63 23.778±21.39
ENSG00000181965 ENST00000314744 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.240±0.00
ENSG00000248753 ENST00000507058 N/A N/A N/A N/A 0.762±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.152±0.00
ENSG00000249639 ENST00000510230 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00 N/A N/A 0.268±0.14 0.356±0.02
ENSG00000249647 ENST00000505663 N/A 0.028±0.00 N/A N/A 0.116±0.00 0.009±0.00 N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.023±0.00
ENST00000555344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.464±0.00
ENSG00000251045 ENST00000508452 N/A N/A 1.023±0.00 0.039±0.00 0.020±0.00 0.146±0.00 0.054±0.00 0.040±0.00 0.107±0.00 0.169±0.00 N/A 0.007±0.00 N/A 0.055±0.00
ENSG00000251380 ENST00000503143 0.011±0.00 0.114±0.00 N/A 0.012±0.00 0.136±0.03 N/A 0.011±0.00 N/A 0.073±0.00 0.005±0.00 0.098±0.00 0.067±0.00 0.040±0.02 N/A
ENSG00000255833 ENST00000537858 N/A 0.212±0.00 N/A N/A 0.051±0.01 0.081±0.06 0.005±0.00 N/A 0.005±0.00 0.121±0.00 0.171±0.00 0.026±0.01 0.015±0.00 0.073±0.03
ENSG00000270021 ENST00000602502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.638±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015937 ENSMUST00000016081 12.337±0.42 N/A 14.721±0.06 68.528±5.22 5.673±1.37 6.495±0.62 N/A 8.127±1.62 12.899±7.40 8.048±0.56 N/A 20.768±8.91 14.001±7.64 9.838±4.86
ENSMUST00000045788 9.913±5.14 9.223±1.94 30.014±1.71 N/A 13.149±3.43 10.767±1.93 4.415±0.59 15.417±3.19 9.882±3.45 16.693±2.67 15.056±4.44 11.878±3.16 7.971±0.43 N/A
ENSMUST00000137835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139511 17.188±7.35 66.140±11.58 27.950±0.00 38.309±4.12 56.278±10.58 62.535±10.57 N/A 20.678±3.11 21.167±5.76 30.978±8.54 11.323±0.00 62.972±10.05 19.464±6.64 19.026±0.00
ENSMUST00000141031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141589 N/A N/A N/A 103.503±0.00 N/A N/A N/A N/A N/A N/A N/A 202.842±0.00 93.000±30.64 62.327±0.00
ENSMUST00000154564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.590±1.34
ENSMUST00000154778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021508 ENSMUST00000021970 55.995±46.22 16.610±5.04 171.554±32.91 13.484±2.56 54.276±15.25 19.883±3.66 7.143±0.20 23.636±2.49 0.602±0.52 131.498±3.39 14.506±2.35 95.025±42.42 1.018±0.75 1.752±1.65
ENSMUSG00000021509 ENSMUST00000021971 8.512±7.28 0.363±0.18 7.215±0.42 0.047±0.01 0.761±0.25 0.393±0.10 0.101±0.03 6.388±0.46 1.680±1.10 0.177±0.05 0.019±0.01 9.457±3.34 8.435±5.83 0.186±0.11
ENSMUSG00000048904 ENSMUST00000058475 N/A N/A N/A 3.578±2.59 0.016±0.00 N/A N/A N/A 0.007±0.00 N/A N/A N/A 0.007±0.00 0.484±0.14
ENSMUSG00000049625 ENSMUST00000169652 2.361±0.58 2.995±0.37 0.782±0.54 0.221±0.13 3.508±1.36 2.263±0.19 0.496±0.10 0.984±0.12 1.582±1.00 4.618±0.82 0.147±0.11 1.429±0.52 0.200±0.15 0.090±0.05
ENSMUSG00000074885 ENSMUST00000099476 N/A N/A 0.076±0.02 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A
ENSMUSG00000097361 ENSMUST00000181629 N/A N/A N/A N/A N/A N/A 0.019±0.00 0.020±0.00 N/A N/A N/A N/A N/A 0.318±0.18

Loading