C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022148 Mccc2-201 ENSMUSG00000021646 10090 - 13:99948533-100015639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022148
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022148 16.374±2.10 18.990±6.43 7.083±0.78 5.118±1.13 15.184±3.38 7.948±0.52 13.470±3.04 37.246±1.69 16.411±9.10 7.617±0.95 12.963±0.90 10.477±4.01 4.515±0.99 2.487±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KO CIL_0002KO_0002 CGP 13:99948533-100104070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004485 ISS methylcrotonoyl-CoA carboxylase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006552 IEA leucine catabolic process
GO:0015936 IEA coenzyme A metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340941 MCCC2-001 protein_coding Homo_sapiens 0 1650
ENST00000505435 MCCC2-010 processed_transcript Homo_sapiens 0 377
ENST00000505787 MCCC2-005 processed_transcript Homo_sapiens 0 712
ENST00000507169 MCCC2-008 processed_transcript Homo_sapiens 0 335
ENST00000509358 MCCC2-003 protein_coding Homo_sapiens 0 1042
ENST00000510895 MCCC2-012 processed_transcript Homo_sapiens 0 643
ENST00000512218 MCCC2-002 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000612168 MCCC2-005 processed_transcript Homo_sapiens 0 409
ENST00000613643 MCCC2-003 protein_coding Homo_sapiens 0 523
ENST00000613980 MCCC2-010 processed_transcript Homo_sapiens 5e-20 99
ENST00000616108 MCCC2-001 protein_coding Homo_sapiens 0 523
ENST00000618068 MCCC2-008 retained_intron Homo_sapiens 0 335
ENST00000621694 MCCC2-012 processed_transcript Homo_sapiens 0 230

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