C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002KO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017571-ENSDARG00000053091 CGP 7955 5:45427420-45553701
GeneTranscriptPositionBiotype
ENSDARG00000017571 (mccc2)
methylcrotonoyl-Coenzyme A carboxylase 2 (beta) 		ENSDART00000022481 (mccc2-001) 45427420-45438245 protein_coding
ENSDART00000140649 (mccc2-002) 45431031-45431404 retained_intron
ENSDARG00000053091 (BDP1 (1 of 2))
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 		ENSDART00000128763 (BDP1 (1 of 2)-201) 45443116-45494744 protein_coding
ENSDART00000142271 (BDP1 (1 of 2)-001) 45492889-45553701 protein_coding
ENSDART00000147252 (BDP1 (1 of 2)-002) 45482477-45485627 protein_coding
ENSDARG00000095369 (zgc:112966)
zgc:112966 		ENSDART00000137303 (zgc:112966-002) 45488999-45490592 processed_transcript
ENSDART00000141002 (zgc:112966-001) 45488971-45491781 protein_coding
ENSDART00000142537 (zgc:112966-003) 45489381-45490184 retained_intron
ENSDART00000147786 (zgc:112966-004) 45489462-45489855 processed_transcript
CIL_0002KO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021646-ENSMUSG00000049658 CGP 10090 13:99948533-100104070
GeneTranscriptPositionBiotype
ENSMUSG00000021646 (Mccc2)
methylcrotonoyl-Coenzyme A carboxylase 2 (beta) 		ENSMUST00000022148 (Mccc2-201) 99948533-100015639 protein_coding
ENSMUSG00000049658 (Bdp1)
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 		ENSMUST00000038104 (Bdp1-001) 100017994-100104070 protein_coding
ENSMUST00000099262 (Bdp1-002) 100017996-100056213 nonsense_mediated_decay
ENSMUST00000105697 (Bdp1-006) 100043355-100046827 retained_intron
ENSMUST00000109379 (Bdp1-003) 100023305-100103838 protein_coding
ENSMUST00000163097 (Bdp1-004) 100097538-100103877 nonsense_mediated_decay
ENSMUST00000167203 (Bdp1-005) 100078734-100098576 nonsense_mediated_decay
ENSMUST00000167815 (Bdp1-007) 100061404-100066451 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KO_0001ENSDARG00000017571ENSDART00000022481ENSDART00000140649ENSDARG00000053091ENSDART00000128763ENSDART00000142271ENSDART00000147252ENSDARG00000095369ENSDART00000137303ENSDART00000141002ENSDART00000142537ENSDART00000147786CIL_0002KO_0002ENSMUSG00000021646ENSMUST00000022148ENSMUSG00000049658ENSMUST00000038104ENSMUST00000099262ENSMUST00000105697ENSMUST00000109379ENSMUST00000163097ENSMUST00000167203ENSMUST00000167815
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KO_0001ENSDARG00000017571ENSDART00000022481ENSDARG00000053091ENSDART00000128763ENSDART00000142271ENSDART00000147252ENSDARG00000095369ENSDART00000137303ENSDART00000141002ENSDART00000142537ENSDART00000147786CIL_0002KO_0002ENSMUSG00000021646ENSMUST00000022148ENSMUSG00000049658ENSMUST00000038104ENSMUST00000099262ENSMUST00000109379
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017571 ENSDART00000022481 N/A N/A N/A 14.278±7.66 N/A N/A 58.257±14.43 20.325±14.87 1.733±0.00 N/A 10.940±0.00 N/A N/A N/A
ENSDART00000140649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000053091 ENSDART00000128763 N/A N/A N/A 0.098±0.02 N/A N/A N/A 0.089±0.00 1.011±0.00 N/A N/A N/A N/A N/A
ENSDART00000142271 N/A N/A N/A 12.244±0.00 N/A N/A 2.897±0.00 N/A 20.633±0.00 N/A 16.880±0.00 N/A N/A N/A
ENSDART00000147252 N/A N/A N/A 11.578±6.55 N/A N/A 4.223±0.00 N/A 19.199±0.00 N/A 18.966±0.00 N/A N/A N/A
ENSDARG00000095369 ENSDART00000137303 N/A N/A N/A N/A N/A N/A 1.082±0.14 0.144±0.00 N/A N/A 0.151±0.00 N/A N/A N/A
ENSDART00000141002 N/A N/A N/A 0.329±0.20 N/A N/A 0.615±0.45 1.631±1.16 0.047±0.00 N/A 0.207±0.00 N/A N/A N/A
ENSDART00000142537 N/A N/A N/A 0.852±0.00 N/A N/A 0.817±0.34 2.146±0.07 N/A N/A N/A N/A N/A N/A
ENSDART00000147786 N/A N/A N/A 0.415±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021646 ENSMUST00000022148 16.374±2.10 18.990±6.43 7.083±0.78 5.118±1.13 15.184±3.38 7.948±0.52 13.470±3.04 37.246±1.69 16.411±9.10 7.617±0.95 12.963±0.90 10.477±4.01 4.515±0.99 2.487±1.00
ENSMUSG00000049658 ENSMUST00000038104 0.612±0.27 0.431±0.20 0.427±0.06 0.850±0.21 0.540±0.29 0.468±0.23 0.424±0.15 0.410±0.16 0.815±0.63 0.997±0.40 0.549±0.15 0.655±0.17 1.669±1.10 0.447±0.15
ENSMUST00000099262 0.319±0.07 N/A 1.649±0.15 2.303±0.65 0.385±0.00 N/A 0.461±0.24 0.486±0.16 1.422±0.88 0.496±0.02 0.726±0.17 2.090±1.11 2.564±0.92 0.420±0.06
ENSMUST00000105697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109379 N/A N/A N/A 1.841±1.32 0.287±0.00 N/A 0.161±0.02 0.133±0.00 0.617±0.39 N/A 0.152±0.01 4.229±2.20 2.174±1.96 1.084±0.90
ENSMUST00000163097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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