C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyruvate dehydrogenase (lipoamide) beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022268 Pdhb-201 ENSMUSG00000021748 10090 - 14:8165991-8172992 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022268
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022268 118.935±24.60 63.887±10.98 43.265±1.61 61.151±2.92 102.824±29.03 21.797±2.24 192.164±33.34 68.968±7.85 54.606±20.73 23.514±5.40 123.553±4.72 34.344±12.29 82.323±26.91 70.911±6.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QD CIL_0002QD_0003 CGP 14:8098213-8172992
CIL_0002QQ CIL_0002QQ_0003 CGP 14:8165991-8223567

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004738 ISS pyruvate dehydrogenase activity
GO:0004739 IEA pyruvate dehydrogenase (acetyl-transferring) activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006006 IEA glucose metabolic process
GO:0006086 ISS acetyl-CoA biosynthetic process from pyruvate
GO:0006099 ISS tricarboxylic acid cycle
GO:0045254 ISS pyruvate dehydrogenase complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302746 PDHB-001 protein_coding Homo_sapiens 0 1387
ENST00000383714 PDHB-008 protein_coding Homo_sapiens 0 1284
ENST00000461692 PDHB-002 retained_intron Homo_sapiens 0 1330
ENST00000469364 PDHB-006 nonsense_mediated_decay Homo_sapiens 0 878
ENST00000474765 PDHB-007 protein_coding Homo_sapiens 0 1066
ENST00000479945 PDHB-003 retained_intron Homo_sapiens 0 538
ENST00000480626 PDHB-011 retained_intron Homo_sapiens 0 558
ENST00000482894 PDHB-010 retained_intron Homo_sapiens 0 355
ENST00000485460 PDHB-005 protein_coding Homo_sapiens 0 804

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