C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyruvate dehydrogenase (lipoamide) beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485460 PDHB-005 ENSG00000168291 9606 - 3:58427672-58433818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000485460
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000485460 7.851±0.00 21.597±0.00 15.181±0.00 12.397±0.00 4.872±2.44 26.225±0.00 16.094±0.00 7.275±3.43 7.278±0.00 9.271±1.07 5.988±0.00 11.028±2.67 13.841±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QD CIL_0002QD_0002 CGP 3:58332880-58433857
CIL_0002QQ CIL_0002QQ_0002 CGP 3:58427630-58502360

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004738 IDA pyruvate dehydrogenase activity
GO:0004739 IEA pyruvate dehydrogenase (acetyl-transferring) activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005759 TAS mitochondrial matrix
GO:0006006 IEA glucose metabolic process
GO:0006086 IDA acetyl-CoA biosynthetic process from pyruvate
GO:0006090 TAS pyruvate metabolic process
GO:0006099 IDA tricarboxylic acid cycle
GO:0008152 IEA metabolic process
GO:0010510 TAS regulation of acetyl-CoA biosynthetic process from pyruvate
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045254 IDA pyruvate dehydrogenase complex
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022268 Pdhb-201 protein_coding Mus_musculus 0 804

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