C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: superkiller viralicidic activity 2-like 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022281 Skiv2l2-201 ENSMUSG00000016018 10090 - 13:112867780-112927380 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000022281
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000022281 6.753±1.63 14.885±1.82 23.284±6.42 4.902±1.15 2.836±0.00 4.097±0.32 6.734±0.37 9.132±7.84 8.987±0.60 17.595±7.80 24.959±14.85 28.535±20.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000178 IEA exosome (RNase complex)
GO:0000460 IEA maturation of 5.8S rRNA
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230640 SKIV2L2-001 protein_coding Homo_sapiens 0 3773
ENST00000502953 SKIV2L2-008 retained_intron Homo_sapiens 0 427
ENST00000504997 SKIV2L2-005 processed_transcript Homo_sapiens 0 350
ENST00000505565 SKIV2L2-007 nonsense_mediated_decay Homo_sapiens 0 684
ENST00000506750 SKIV2L2-002 nonsense_mediated_decay Homo_sapiens 0 3483
ENST00000508716 SKIV2L2-003 protein_coding Homo_sapiens 0 254
ENST00000518955 SKIV2L2-009 retained_intron Homo_sapiens 0 568

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