C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: superkiller viralicidic activity 2-like 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000230640 SKIV2L2-001 ENSG00000039123 9606 + 5:55307760-55425581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverLungMuscleOvaryPlacentaENST00000230640
Transcript ID Brain Heart Liver Lung Muscle Ovary Placenta
ENST00000230640 1.546±0.00 1.462±0.00 3.123±0.00 1.605±0.00 2.116±0.00 2.728±0.45 2.628±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G0 CIL_0007G0_0002 CGP 5:55256245-55425581

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000178 IDA exosome (RNase complex)
GO:0000398 IC mRNA splicing, via spliceosome
GO:0000460 IMP maturation of 5.8S rRNA
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0044822 IDA poly(A) RNA binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022281 Skiv2l2-201 protein_coding Mus_musculus 0 3773

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