C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELL associated factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022446 Eaf1-201 ENSMUSG00000021890 10090 + 14:31495079-31509858 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022446
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022446 9.068±2.95 16.836±1.99 8.698±0.75 3.728±1.57 8.170±2.88 9.044±1.49 3.730±0.46 11.552±0.76 13.658±6.28 12.566±1.00 3.921±0.40 11.199±2.13 9.432±3.16 7.029±2.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522
CIL_0005AK CIL_0005AK_0002 CGP 14:31478320-31509858
CIL_0005AJ CIL_0005AJ_0002 CGP 14:31495079-31591343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008023 ISS transcription elongation factor complex
GO:0032783 IEA ELL-EAF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000396842 EAF1-001 protein_coding Homo_sapiens 0 1190
ENST00000449565 EAF1-002 nonsense_mediated_decay Homo_sapiens 0 649

Loading