C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELL associated factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396842 EAF1-001 ENSG00000144597 9606 + 3:15427355-15442613 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396842
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396842 4.440±0.00 3.438±0.00 1.200±0.00 4.552±0.52 2.701±0.27 5.192±0.00 1.420±0.54 5.048±2.71 2.883±1.15 2.112±0.10 1.691±0.83 3.118±0.40 3.682±1.33 6.880±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AH CIL_0005AH_0001 CGP 3:15254853-15440566
CIL_0005AK CIL_0005AK_0001 CGP 3:15381275-15450635
CIL_0005AJ CIL_0005AJ_0001 CGP 3:15427355-15521751

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008023 IDA transcription elongation factor complex
GO:0032783 IEA ELL-EAF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022446 Eaf1-201 protein_coding Mus_musculus 0 1190

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