C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: L-threonine dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022522 Tdh-001 ENSMUSG00000021953 10090 - 14:63492347-63509092 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000022522
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000022522 0.017±0.00 0.102±0.00 0.161±0.07 0.039±0.01 0.016±0.00 0.019±0.00 0.092±0.04 0.025±0.01 0.076±0.03 7.988±10.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000919 CIL_000919_0002 VISTA 14:62906721-63507169
CIL_0008Y4 CIL_0008Y4_0002 VISTA 14:63067789-63669845

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006567 IDA threonine catabolic process
GO:0008743 IDA L-threonine 3-dehydrogenase activity
GO:0019518 IEA L-threonine catabolic process to glycine
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000525246 TDH-003 processed_transcript Homo_sapiens 0 366
ENST00000525664 TDH-004 processed_transcript Homo_sapiens 0 520
ENST00000534302 TDH-002 processed_transcript Homo_sapiens 0 366

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