C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho-related BTB domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022665 Rhobtb2-201 ENSMUSG00000022075 10090 - 14:69784990-69805530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022665
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022665 6.381±2.49 6.721±0.43 2.533±1.54 8.905±2.04 6.947±2.81 3.894±0.26 4.678±0.59 5.747±0.26 1.792±0.53 4.681±0.06 6.005±0.59 6.125±2.19 1.149±0.21 2.316±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YD CIL_0007YD_0002 VISTA 14:69222690-69823937
CIL_0008FQ CIL_0008FQ_0002 VISTA 14:69236074-69837250

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051114 rhobtb2a-201 protein_coding Danio_rerio 0 490
ENSDART00000111587 rhobtb2a-001 protein_coding Danio_rerio 0 490
ENSDART00000123496 rhobtb2b-201 protein_coding Danio_rerio 0 449
ENST00000251822 RHOBTB2-001 protein_coding Homo_sapiens 0 3181
ENST00000276431 TNFRSF10B-001 protein_coding Homo_sapiens 1e-17 97
ENST00000517528 RHOBTB2-006 retained_intron Homo_sapiens 0 455
ENST00000519210 RHOBTB2-008 retained_intron Homo_sapiens 0 329
ENST00000519685 RHOBTB2-002 protein_coding Homo_sapiens 0 2966
ENST00000522948 RHOBTB2-003 protein_coding Homo_sapiens 0 2964
ENST00000523752 TNFRSF10B-004 retained_intron Homo_sapiens 1e-17 97
ENST00000523918 RHOBTB2-007 processed_transcript Homo_sapiens 0 676
ENST00000524077 RHOBTB2-004 protein_coding Homo_sapiens 0 689

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