C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022791 Fbxo4-001 ENSMUSG00000022184 10090 - 15:3965445-3979573 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022791
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022791 12.485±0.37 14.755±4.18 10.312±1.29 2.378±1.07 10.615±3.47 7.400±2.13 3.752±0.18 6.076±0.61 3.802±1.28 10.518±1.59 1.239±0.34 7.785±3.11 2.899±1.32 3.903±2.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003B8 CIL_0003B8_0002 CGP 15:3317760-3979573
CIL_0005HB CIL_0005HB_0002 CGP 15:3965445-3995752

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0000209 ISS protein polyubiquitination
GO:0000723 ISS telomere maintenance
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0016567 IEA protein ubiquitination
GO:0019005 ISS SCF ubiquitin ligase complex
GO:0031146 ISS SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031398 ISS positive regulation of protein ubiquitination
GO:0042803 IEA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281623 FBXO4-001 protein_coding Homo_sapiens 0 1223
ENST00000296812 FBXO4-002 protein_coding Homo_sapiens 0 872
ENST00000504463 FBXO4-007 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000505566 FBXO4-004 retained_intron Homo_sapiens 0 366
ENST00000506496 FBXO4-005 retained_intron Homo_sapiens 0 263
ENST00000509134 FBXO4-003 protein_coding Homo_sapiens 0 872
ENST00000513496 FBXO4-006 nonsense_mediated_decay Homo_sapiens 0 497

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