C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V1 subunit C1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022904 Atp6v1c1-201 ENSMUSG00000022295 10090 + 15:38661904-38692443 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022904 19.814±4.60 23.501±2.64 25.110±3.39 40.580±20.71 21.677±5.66 14.344±3.59 14.014±3.45 55.317±2.77 14.417±2.18 21.172±2.22 9.517±0.50 27.503±8.40 30.319±10.05 22.366±4.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T5 CIL_0004T5_0004 CGP 15:38487430-38692443
CIL_0006A8 CIL_0006A8_0002 CGP 15:38661904-38949405

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005765 IEA lysosomal membrane
GO:0005886 IDA plasma membrane
GO:0008553 IDA hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0031410 IEA cytoplasmic vesicle
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0045177 IEA apical part of cell
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395862 ATP6V1C1-001 protein_coding Homo_sapiens 0 1748
ENST00000518738 ATP6V1C1-004 protein_coding Homo_sapiens 0 1773
ENST00000518857 ATP6V1C1-002 protein_coding Homo_sapiens 0 1426
ENST00000518959 ATP6V1C1-006 retained_intron Homo_sapiens 0 403
ENST00000521514 ATP6V1C1-003 protein_coding Homo_sapiens 0 1493
ENST00000521671 ATP6V1C1-005 retained_intron Homo_sapiens 0 625

Loading