C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395862 ATP6V1C1-001 ENSG00000155097 9606 + 8:103021063-103073051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLungOvaryPlacentaTestisENST00000395862
Transcript ID Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000395862 19.494±3.27 2.833±0.00 3.518±0.00 8.164±0.00 0.661±0.00 2.746±1.68 1.015±0.00 3.082±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T5 CIL_0004T5_0003 CGP 8:102826357-103073051
CIL_0006A8 CIL_0006A8_0001 CGP 8:103021063-103230305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 NAS transporter activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005765 IDA lysosomal membrane
GO:0005829 TAS cytosol
GO:0005886 ISS plasma membrane
GO:0006879 TAS cellular iron ion homeostasis
GO:0008286 TAS insulin receptor signaling pathway
GO:0008553 IEA hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 TAS proton transport
GO:0016469 TAS proton-transporting two-sector ATPase complex
GO:0031410 IEA cytoplasmic vesicle
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0033572 TAS transferrin transport
GO:0045177 IEA apical part of cell
GO:0046961 TAS proton-transporting ATPase activity, rotational mechanism
GO:0051701 TAS interaction with host
GO:0055085 TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022904 Atp6v1c1-201 protein_coding Mus_musculus 0 1748

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