C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ER membrane protein complex subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022962 Emc2-201 ENSMUSG00000022337 10090 + 15:43477229-43527777 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022962
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022962 17.856±5.48 3.776±0.72 35.454±2.52 21.877±5.41 11.609±4.19 4.724±1.08 29.014±2.83 12.804±2.34 14.646±8.03 8.253±2.09 38.741±1.69 8.359±9.99 25.757±4.67 11.035±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T2 CIL_0004T2_0003 CGP 15:43250040-43527777
CIL_0004T3 CIL_0004T3_0003 CGP 15:43477229-43870029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005739 IDA mitochondrion
GO:0005783 ISS endoplasmic reticulum
GO:0008150 ND biological_process
GO:0072546 ISS ER membrane protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220853 EMC2-001 protein_coding Homo_sapiens 0 1437
ENST00000517593 EMC2-004 retained_intron Homo_sapiens 0 523
ENST00000517784 EMC2-006 processed_transcript Homo_sapiens 0 741
ENST00000519450 EMC2-002 retained_intron Homo_sapiens 0 688
ENST00000519642 EMC2-007 protein_coding Homo_sapiens 0 501
ENST00000520294 EMC2-005 processed_transcript Homo_sapiens 0 782
ENST00000524143 EMC2-003 protein_coding Homo_sapiens 0 416

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