C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome c-1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023210 Cyc1-201 ENSMUSG00000022551 10090 + 15:76343523-76345934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023210
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023210 222.990±48.33 307.491±49.42 110.210±14.95 97.758±49.32 250.758±52.53 273.173±7.81 703.602±56.33 430.662±19.74 214.920±32.73 79.988±15.85 302.237±22.01 126.680±34.28 80.608±49.98 26.965±12.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_00026V CIL_00026V_0002 CGP 15:76331231-76345934
CIL_00026W CIL_00026W_0002 CGP 15:76343523-76351111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0009055 IEA electron carrier activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0020037 IEA heme binding
GO:0033762 IEA response to glucagon
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318911 CYC1-001 protein_coding Homo_sapiens 0 1236
ENST00000525122 CYC1-004 retained_intron Homo_sapiens 5.00264e-43 178
ENST00000528618 CYC1-003 retained_intron Homo_sapiens 0 494
ENST00000533444 CYC1-002 retained_intron Homo_sapiens 0 1118

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