C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome c-1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318911 CYC1-001 ENSG00000179091 9606 + 8:144095027-144097525 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318911
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318911 64.369±0.00 78.027±0.00 13.805±0.00 54.377±30.72 56.926±44.96 52.655±34.66 128.851±90.17 100.455±73.32 47.454±34.23 34.893±28.82 151.955±35.03 56.174±28.17 60.937±30.44 37.476±24.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_00026V CIL_00026V_0001 CGP 8:144082590-144097525
CIL_00026W CIL_00026W_0001 CGP 8:144095027-144108124

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0009055 IEA electron carrier activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0020037 IEA heme binding
GO:0022904 TAS respiratory electron transport chain
GO:0033762 IEA response to glucagon
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045155 TAS electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity
GO:0070469 IEA respiratory chain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023210 Cyc1-201 protein_coding Mus_musculus 0 1236

Loading