C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GPI-anchored HDL-binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023243 Gpihbp1-002 ENSMUSG00000022579 10090 + 15:75596630-75598213 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023243
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023243 200.075±143.39 71.148±14.55 8.430±0.86 0.596±0.21 102.678±19.17 4.793±0.76 59.792±7.58 18.876±0.90 14.722±9.02 198.257±8.64 16.596±3.13 17.496±3.59 2.560±1.08 0.481±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0002NW CIL_0002NW_0002 CGP 15:75551268-75599481
CIL_0002NY CIL_0002NY_0002 CGP 15:75596628-75625300

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006869 IDA lipid transport
GO:0006886 IDA intracellular protein transport
GO:0008035 IDA high-density lipoprotein particle binding
GO:0008289 IEA lipid binding
GO:0008320 IDA protein transmembrane transporter activity
GO:0009897 IDA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0016323 IDA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0017038 IDA protein import
GO:0031362 IEA anchored component of external side of plasma membrane
GO:0034364 IEA high-density lipoprotein particle
GO:0034394 IDA protein localization to cell surface
GO:0035473 IPI lipase binding
GO:0035478 IMP chylomicron binding
GO:0042632 IMP cholesterol homeostasis
GO:0045056 IDA transcytosis
GO:0046658 IDA anchored component of plasma membrane
GO:0050821 IDA protein stabilization
GO:0051006 IMP positive regulation of lipoprotein lipase activity
GO:0070328 IMP triglyceride homeostasis
GO:0071503 IEA response to heparin
GO:0071806 IDA protein transmembrane transport
GO:0071813 IMP lipoprotein particle binding
GO:0090319 IC positive regulation of chylomicron remodeling
GO:0090321 IMP positive regulation of chylomicron remnant clearance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000002501 ip6k2-001 protein_coding Danio_rerio 0.00000009 62

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