C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein L24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023269 Rpl24-001 ENSMUSG00000098274 10090 + 16:55966275-55971435 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023269
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023269 74.690±31.21 409.138±4.21 187.590±1.43 49.473±14.45 56.175±18.31 91.651±14.94 99.550±23.34 217.632±194.43 43.610±15.92 269.171±16.96 124.839±140.07 331.131±145.37 120.502±20.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000320 CIL_000320_0002 CGP 16:55899888-55971435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000027 IMP ribosomal large subunit assembly
GO:0006412 IMP translation
GO:0007093 IMP mitotic cell cycle checkpoint
GO:0010458 IMP exit from mitosis
GO:0021554 IMP optic nerve development
GO:0031290 IMP retinal ganglion cell axon guidance
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326586 RPL24P4-001 processed_pseudogene Homo_sapiens 0 536
ENST00000394077 RPL24-001 protein_coding Homo_sapiens 0 680
ENST00000399435 RPL24P7-001 processed_pseudogene Homo_sapiens 0 394
ENST00000421023 RPL24P2-001 processed_pseudogene Homo_sapiens 0 558
ENST00000427883 RP11-706O15.8-001 processed_pseudogene Homo_sapiens 0 409
ENST00000446071 RPL24P8-001 processed_pseudogene Homo_sapiens 0 604
ENST00000447479 RP11-448G4.2-001 processed_pseudogene Homo_sapiens 0 490
ENST00000454858 AC091633.2-001 processed_pseudogene Homo_sapiens 0 547
ENST00000464595 RPL24-005 retained_intron Homo_sapiens 0 651
ENST00000469605 RPL24-007 protein_coding Homo_sapiens 0 566
ENST00000470961 RPL24-006 retained_intron Homo_sapiens 7e-32 141
ENST00000488288 RPL24-004 retained_intron Homo_sapiens 0 294
ENST00000495401 RPL24-003 protein_coding Homo_sapiens 0 481

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