C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394077 RPL24-001 ENSG00000114391 9606 - 3:101681092-101686782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394077
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394077 287.656±0.00 302.293±0.00 54.286±0.00 165.850±32.94 227.271±0.48 335.376±127.11 141.477±58.93 225.589±62.40 226.979±24.35 432.845±281.06 254.809±68.41 633.175±433.88 575.939±140.95 231.803±67.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 NAS structural constituent of ribosome
GO:0005829 TAS cytosol
GO:0006412 NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023269 Rpl24-001 protein_coding Mus_musculus 0 680
ENSMUST00000117563 Gm9385-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000137811 Rpl24-002 processed_transcript Mus_musculus 0 651
ENSMUST00000134617 Gm12254-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000171339 Gm17430-201 protein_coding Mus_musculus 0 529
ENSMUST00000126419 Rpl24-003 retained_intron Mus_musculus 0 468
ENSMUST00000187674 RP23-91L14.2-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000119291 Gadl1-002 protein_coding Mus_musculus 0 270
ENSDART00000152626 rpl24-001 protein_coding Danio_rerio 0 255

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