C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fgfr1op N-terminal like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023357 Fopnl-001 ENSMUSG00000022677 10090 - 16:14299244-14317375 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023357
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023357 19.441±0.97 18.759±4.21 22.974±0.00 7.789±4.90 16.366±4.28 21.506±5.27 12.846±4.34 11.267±2.55 11.229±6.47 13.941±1.04 13.334±2.03 19.011±13.28 7.900±3.50 6.070±3.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TD CIL_0002TD_0002 CGP 16:14194527-14317375
CIL_0006MS CIL_0006MS_0002 CGP 16:14299244-14475737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0031514 IDA motile cilium
GO:0034451 ISS centriolar satellite
GO:0034453 IEA microtubule anchoring
GO:0036064 IDA ciliary basal body
GO:0042384 ISS cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255759 FOPNL-001 protein_coding Homo_sapiens 0 490
ENST00000572415 FOPNL-004 nonsense_mediated_decay Homo_sapiens 0 313
ENST00000573087 FOPNL-003 nonsense_mediated_decay Homo_sapiens 0 313
ENST00000573396 FOPNL-008 protein_coding Homo_sapiens 0 311
ENST00000573429 FOPNL-005 protein_coding Homo_sapiens 0 311
ENST00000573968 FOPNL-002 protein_coding Homo_sapiens 0 313
ENST00000575073 FOPNL-007 protein_coding Homo_sapiens 0 440
ENST00000575938 FOPNL-009 protein_coding Homo_sapiens 0 337
ENST00000622266 FOPNL-201 protein_coding Homo_sapiens 0 479

Loading