C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023580 Usp25-201 ENSMUSG00000022867 10090 + 16:77014069-77116779 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023580
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023580 10.037±2.51 11.241±0.80 12.885±0.61 3.963±1.21 13.233±3.90 8.119±3.11 6.888±2.72 10.393±2.32 13.933±11.69 16.105±4.44 11.949±6.17 9.486±2.73 11.741±2.87 19.784±7.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083Q CIL_00083Q_0002 VISTA 16:76989984-77593024

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 ISS proteasome complex
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0032183 IEA SUMO binding
GO:0070536 IEA protein K63-linked deubiquitination
GO:0071108 IEA protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285679 USP25-002 protein_coding Homo_sapiens 0 4058
ENST00000285681 USP25-001 protein_coding Homo_sapiens 0 2754
ENST00000351097 USP25-003 protein_coding Homo_sapiens 0 1070
ENST00000400183 USP25-201 protein_coding Homo_sapiens 0 2754
ENST00000449491 USP25-006 protein_coding Homo_sapiens 0 604
ENST00000453553 USP25-005 protein_coding Homo_sapiens 0 619
ENST00000464435 USP25-007 retained_intron Homo_sapiens 0 359
ENST00000478932 USP25-004 retained_intron Homo_sapiens 0 708
ENST00000547201 USP25-008 processed_transcript Homo_sapiens 0 968
ENST00000549362 USP25-009 processed_transcript Homo_sapiens 0 713

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