C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane BAX inhibitor motif containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023749 Tmbim6-001 ENSMUSG00000023010 10090 + 15:99392882-99410049 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023749 179.197±31.56 243.952±17.49 148.542±12.93 57.022±8.64 168.339±63.79 252.725±53.58 52.050±7.06 702.251±34.28 285.895±186.05 337.536±2.29 69.848±7.15 117.026±62.32 115.636±31.96 38.410±13.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009O CIL_00009O_0002 CGP 15:99317225-99410049
CIL_00003M CIL_00003M_0002 CGP 15:99392882-99457748

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006986 IEA response to unfolded protein
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0032469 IDA endoplasmic reticulum calcium ion homeostasis
GO:0043066 IEA negative regulation of apoptotic process
GO:0070059 IDA intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:1902236 IGI negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267115 TMBIM6-002 protein_coding Homo_sapiens 0 981
ENST00000395006 TMBIM6-007 protein_coding Homo_sapiens 0 965
ENST00000423828 TMBIM6-201 protein_coding Homo_sapiens 0 965
ENST00000546796 TMBIM6-027 protein_coding Homo_sapiens 0 505
ENST00000546914 TMBIM6-029 protein_coding Homo_sapiens 0 342
ENST00000547187 TMBIM6-011 protein_coding Homo_sapiens 0 344
ENST00000547798 TMBIM6-006 protein_coding Homo_sapiens 0 872
ENST00000547832 TMBIM6-012 protein_coding Homo_sapiens 0 483
ENST00000548201 TMBIM6-017 protein_coding Homo_sapiens 0 464
ENST00000549130 TMBIM6-028 protein_coding Homo_sapiens 0 327
ENST00000549385 TMBIM6-003 protein_coding Homo_sapiens 0 965
ENST00000549445 TMBIM6-016 protein_coding Homo_sapiens 0 342
ENST00000549966 TMBIM6-026 protein_coding Homo_sapiens 0 379
ENST00000550445 TMBIM6-018 protein_coding Homo_sapiens 0 503
ENST00000552370 TMBIM6-020 protein_coding Homo_sapiens 0 806
ENST00000552635 TMBIM6-021 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000552699 TMBIM6-001 protein_coding Homo_sapiens 0 965
ENST00000553022 TMBIM6-022 retained_intron Homo_sapiens 0 333

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