C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 4, member n
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024118 Clec4n-001 ENSMUSG00000023349 10090 + 6:123229854-123247019 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024118
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024118 0.460±0.19 0.470±0.22 1.525±0.27 0.266±0.00 2.365±0.83 1.084±0.23 0.268±0.09 0.173±0.10 3.589±2.67 4.945±0.80 0.477±0.00 1.048±0.55 0.406±0.35 0.182±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XR CIL_0003XR_000K CGP 6:123172893-123247021
CIL_0003XR CIL_0003XR_000D CGP 6:123229843-123275268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016021 IEA integral component of membrane
GO:0030246 IDA carbohydrate binding
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087 IDA innate immune response
GO:0050715 IDA positive regulation of cytokine secretion
GO:0050832 IDA defense response to fungus

Homologs

No Homologs available.

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