C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024238 Celsr3-201 ENSMUSG00000023473 10090 + 9:108826320-108852963 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024238 0.076±0.02 0.449±0.10 0.038±0.00 13.118±7.65 0.081±0.05 0.331±0.11 0.077±0.00 0.032±0.01 0.047±0.05 0.032±0.00 0.075±0.02 0.058±0.02 0.047±0.02 0.020±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0004930 IEA G-protein coupled receptor activity
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007218 IEA neuropeptide signaling pathway
GO:0007413 IMP axonal fasciculation
GO:0016021 IEA integral component of membrane
GO:0032880 IGI regulation of protein localization
GO:0042384 IGI cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000003091 CELSR2 (2 of 2)-201 protein_coding Danio_rerio 0 250
ENST00000164024 CELSR3-001 protein_coding Homo_sapiens 0 11360
ENST00000262738 CELSR1-001 protein_coding Homo_sapiens 0 488
ENST00000454637 CELSR1-002 protein_coding Homo_sapiens 0 448
ENST00000461362 CELSR3-002 retained_intron Homo_sapiens 0 2388
ENST00000470999 CELSR3-004 retained_intron Homo_sapiens 0 514
ENST00000498057 CELSR3-003 retained_intron Homo_sapiens 0 1319

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