C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cadherin, EGF LAG seven-pass G-type receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454637 CELSR1-002 ENSG00000075275 9606 - 22:46462780-46535294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleENST00000454637
Transcript ID Colon Muscle
ENST00000454637 0.476±0.00 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024N CIL_00024N_0001 CGP 22:46330875-46537170
CIL_0008BF CIL_0008BF_0001 VISTA 22:46352708-46954203
CIL_0000V3 CIL_0000V3_0002 CGP 22:46360834-46679790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016172 Celsr1-201 protein_coding Mus_musculus 0 2407
ENSMUST00000024238 Celsr3-201 protein_coding Mus_musculus 0 448
ENSDART00000003091 CELSR2 (2 of 2)-201 protein_coding Danio_rerio 0 292

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