C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF hand domain family, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024725 Efhb-201 ENSMUSG00000023931 10090 - 17:53398889-53463321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024725
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024725 0.064±0.00 0.059±0.02 0.109±0.07 0.639±0.00 0.109±0.08 0.223±0.15 0.040±0.02 0.025±0.01 0.018±0.01 0.242±0.12 0.014±0.00 0.883±0.52 0.067±0.04 15.757±7.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HS CIL_0004HS_0002 CGP 17:52602709-53463321
CIL_0002VJ CIL_0002VJ_0003 CGP 17:53398889-53507671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295824 EFHB-001 protein_coding Homo_sapiens 0 1652
ENST00000344838 EFHB-002 protein_coding Homo_sapiens 0 1640
ENST00000389256 EFHB-003 protein_coding Homo_sapiens 0 1051
ENST00000440022 EFHB-006 protein_coding Homo_sapiens 0 702
ENST00000498089 EFHB-004 processed_transcript Homo_sapiens 0 1051

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